Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28d24
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.55 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   1.7  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   3.9  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.1  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   9.0  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 365 FEIFAEERCTQTSS--RALIEFMAEVDGRCNFFEKFQADCSLXIMFLG 502
           F+   EE C +      AL  F   + G C+   +  A+C++ ++  G
Sbjct: 779 FKSHLEEACKKVMKAINALAAFTPNIGGPCSSIRRLHANCAISVLRYG 826


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 256 ISAQLQQFLCCQWILV 209
           +S+Q+QQFLC Q +L+
Sbjct: 537 VSSQMQQFLCLQNVLL 552


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 83  WFTTDDGKYKIVSLTAATFPGALDIIREDF 172
           W T   G+  +VS+    F   +D  REDF
Sbjct: 46  WVTDTTGRVAVVSVGDYPFQRIIDNQREDF 75


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 494  FLGTQRAHRNRKLGTI 541
            F+  QRAH N KL TI
Sbjct: 1069 FVAVQRAHDNAKLQTI 1084


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 357 NLSSKYLQKNVAHKLPLVR 413
           +LSS YL+ N  H +P++R
Sbjct: 40  HLSSDYLKINPLHTVPVLR 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,744
Number of Sequences: 2352
Number of extensions: 10768
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)