Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28d23
         (478 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   174   4e-44
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   174   4e-44
AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p pro...    28   7.5  
AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA...    28   7.5  
BT010225-1|AAQ23543.1| 1173|Drosophila melanogaster RE72153p pro...    27   9.9  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  174 bits (424), Expect = 4e-44
 Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
 Frame = +2

Query: 80  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
           ++M  EL +  YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+
Sbjct: 86  VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145

Query: 440 LPPXF--AGSW 466
           LP      G W
Sbjct: 146 LPQKLQELGGW 156


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  174 bits (424), Expect = 4e-44
 Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
 Frame = +2

Query: 80  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
           ++M  EL +  YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+
Sbjct: 86  VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145

Query: 440 LPPXF--AGSW 466
           LP      G W
Sbjct: 146 LPQKLQELGGW 156


>AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p
           protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/69 (23%), Positives = 31/69 (44%)
 Frame = +2

Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDL 442
           E+  EL  H ++ SL W     TG   ++ + G    NNL++ ++      ++ +     
Sbjct: 329 EIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVA 388

Query: 443 PPXFAGSWW 469
              +A +WW
Sbjct: 389 YFVYAFNWW 397


>AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA
           protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/69 (23%), Positives = 31/69 (44%)
 Frame = +2

Query: 263 EMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDL 442
           E+  EL  H ++ SL W     TG   ++ + G    NNL++ ++      ++ +     
Sbjct: 329 EIEIELFRHLHQLSLRWHLQRKTGEVLRVMDRGTDSINNLLNYIVFSIAPTILDLLVAVA 388

Query: 443 PPXFAGSWW 469
              +A +WW
Sbjct: 389 YFVYAFNWW 397


>BT010225-1|AAQ23543.1| 1173|Drosophila melanogaster RE72153p protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 256  RHRNGNGAWSTFLPLLSVLAKAYAY 330
            R  NG+G WS  LPL SV    +A+
Sbjct: 1006 RRSNGHGGWSRRLPLASVRDPHFAH 1030


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,206,267
Number of Sequences: 53049
Number of extensions: 489408
Number of successful extensions: 898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)