Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28d16
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 149 2e-36
U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical pr... 30 0.90
AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical ... 29 2.7
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 4.8
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 27 8.4
U39999-3|AAR85904.2| 114|Caenorhabditis elegans Insulin related... 27 8.4
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 8.4
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 8.4
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 8.4
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 8.4
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 149 bits (360), Expect = 2e-36
Identities = 76/137 (55%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
Frame = +1
Query: 106 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 285
MS C IS S SG +F+RR+I K+I ENG DPI+ EL + L
Sbjct: 1 MSFVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGT 60
Query: 286 XXXXXX-SATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIAR 462
S TSIP+ LK +QDEWD +ML++F+ RQQLQ ARQELSH+LYQHDAACRVI+R
Sbjct: 61 GSAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISR 120
Query: 463 LTKEVTAAREALATLKP 513
L+KE+TAAREAL+TLKP
Sbjct: 121 LSKELTAAREALSTLKP 137
>U58746-5|AAB00625.1| 310|Caenorhabditis elegans Hypothetical
protein R05G6.4 protein.
Length = 310
Score = 30.3 bits (65), Expect = 0.90
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 166 SGAVFERRIIEKYIIENGVDPINGKELRVEDL 261
S +V + ++EK I +G+DPING+ + +D+
Sbjct: 251 SKSVVKYDVVEKLIKGDGIDPINGEPMSEDDI 282
>AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical
protein Y62H9A.1 protein.
Length = 366
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -1
Query: 278 GVLISIRSSTLNSLPLIGSTPFSIMYFSMILLSNT 174
GVL+ I ++T +L L+ TPF F+M++L+ T
Sbjct: 264 GVLVGIPAATAMALLLMQYTPFEGFPFAMVVLAPT 298
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 306 TWRFWLYYRWCFDLNKVLNSQLLAVNRIHAIFYYVL 199
+WR+W+Y +W + ++ ++ +IH YVL
Sbjct: 500 SWRYWMYSKWNLETSRHPEMHIMK-GKIHGRTKYVL 534
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 389 CCLCVKACNIRASHSSCML 333
C LCV C+ + +H SC L
Sbjct: 1839 CALCVNNCSNKCAHRSCTL 1857
>U39999-3|AAR85904.2| 114|Caenorhabditis elegans Insulin related
protein 15 protein.
Length = 114
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 504 CGEGLSRRRHLLCESGYHTTRCVVLVQC 421
CGE LSRR LC G T + + C
Sbjct: 38 CGESLSRRVAFLCNGGAIQTEILRALDC 65
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 413 NSCLAVCNCCLCVKACNIRASHSSC 339
N C VC C K CN + SC
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGECSC 794
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 413 NSCLAVCNCCLCVKACNIRASHSSC 339
N C VC C K CN + SC
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGECSC 794
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 413 NSCLAVCNCCLCVKACNIRASHSSC 339
N C VC C K CN + SC
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGECSC 794
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 413 NSCLAVCNCCLCVKACNIRASHSSC 339
N C VC C K CN + SC
Sbjct: 770 NGCRQVCRCTSEYKQCNAQTGECSC 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,369,886
Number of Sequences: 27780
Number of extensions: 255769
Number of successful extensions: 685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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