Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28d16
         (530 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.64 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.9  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 317 IDVALGGFGFTIGGVLISIRSSTLNSLPLIGSTPFSI 207
           +D+ LGG  +   G  +S  +  LN+ P IG   F I
Sbjct: 70  VDIVLGGLTYWAFGFAMSFGTDKLNN-PFIGMGEFLI 105


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 300 RFWLYYRWCFDLNKVLNSQLLAVNRIHAI 214
           + WL   W F+L K   +Q+  +  IH +
Sbjct: 226 KIWLRPDWLFNLTKYGKNQIKLLEIIHGL 254


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 450 CDSPTHKGGDGGARGPRHTETAGRHC 527
           C S  H    GGA    H E   R C
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRC 326


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 433 HDAACRVIARLTKEVTAAREALATLKPQAGI 525
           H   CR + RLT++V  +  A   +    G+
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGV 235


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 433 HDAACRVIARLTKEVTAAREALATLKPQAGI 525
           H   CR + RLT++V  +  A   +    G+
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGV 235


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 434 CWYNA*LNSCLAVCNCC 384
           C Y A    C A+C+CC
Sbjct: 737 CRYEA---HCFALCHCC 750


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 290 FTIGGVLISIRSSTLNSLPLIGSTPFSIM 204
           FT  G +    ++  NSLP I  TP  I+
Sbjct: 296 FTPFGPVTEKVNNDSNSLPFIDRTPIEII 324


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 290 FTIGGVLISIRSSTLNSLPLIGSTPFSIM 204
           FT  G +    ++  NSLP I  TP  I+
Sbjct: 296 FTPFGPVTEKVNNDSNSLPFIDRTPIEII 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,527
Number of Sequences: 438
Number of extensions: 2895
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)