Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28d12
         (347 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    39   0.001
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    38   0.001
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    38   0.003
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    31   0.17 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    29   0.91 
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical ...    28   1.6  
U80437-17|AAB37628.1|  180|Caenorhabditis elegans Hypothetical p...    27   4.9  
AF016430-6|AAK95869.1|  274|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    27   4.9  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    27   4.9  
Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical ...    26   8.5  

>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +2

Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
           RI+GG++ + GA+  +A LV    NG+  +CGA+++ +   VTAAHC
Sbjct: 37  RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = +2

Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 328
           R+VGG     GA P  A L    T      CGAS+L  T  +TAAHC+
Sbjct: 26  RVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHCF 71


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
           T I+ G +AN+     LA ++    +G T++CG  L+  +  +T+AHC
Sbjct: 15  TSIINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.5 bits (68), Expect = 0.17
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +2

Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRR 340
           R++GGS ++  + P    L+  L + R   CG SL+     +TAAHC+   R
Sbjct: 57  RLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCFAKDR 105


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +2

Query: 200 SAANAGAHPHLAGLVIAL-TNGRTS----ICGASLLTNTRSVTAAHCWR 331
           +A N G   HLA   + +    R      ICG +L+T    +TAAHC++
Sbjct: 32  AAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCFQ 80


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 257 SSVRSQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSRPGGY 126
           S   SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 351 SKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 257 SSVRSQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSRPGGY 126
           S   SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 351 SKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>AL023844-1|CAA19526.1|  401|Caenorhabditis elegans Hypothetical
           protein Y48A6B.1 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 181 TVEVSGFLGASKTLGPGDTDLVVVVKFDGLF 89
           TV V   +  ++ LG  +TDL+   KFDGL+
Sbjct: 171 TVMVHKIVPVTEVLGMNETDLLEGAKFDGLY 201


>U80437-17|AAB37628.1|  180|Caenorhabditis elegans Hypothetical
           protein C43E11.9 protein.
          Length = 180

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -2

Query: 187 PGTVEVSGFLGASKTLGPGDTDLVVVVKFDGLFCHDHGRQRHQYCCEDL 41
           P T E +  + A      GD   +++ + DG +C  + ++R  YC E+L
Sbjct: 3   PLTEEETSLVFAKLASFIGDNVSMLIDRNDGDYCFRNHKERVYYCSENL 51


>AF016430-6|AAK95869.1|  274|Caenorhabditis elegans Hypothetical
           protein C05C8.9a protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 275 RWKFCHSSVRSQVQQDGGEHQRWRQNHPQSWYRR 174
           RWK     +R  V +    ++ W+ NH + W  R
Sbjct: 237 RWKVREFMLRHDVPRLNENNEDWKANHDKDWSPR 270


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 248 ALTNGRTSICGASLLTNTRSVTAAHCWR 331
           A  NGR S+  A ++ +T  V   H WR
Sbjct: 781 ATVNGRCSLLFAQMMLSTYDVLIEHMWR 808


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 248 ALTNGRTSICGASLLTNTRSVTAAHCWR 331
           A  NGR S+  A ++ +T  V   H WR
Sbjct: 781 ATVNGRCSLLFAQMMLSTYDVLIEHMWR 808


>Z81135-4|CAB03457.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 199 TTHNPGTVEVSGFLGASKTLG 137
           TTH P T + SG+ G  K  G
Sbjct: 348 TTHRPKTADFSGYWGVLKAAG 368


>AL032634-4|CAA21599.1|  500|Caenorhabditis elegans Hypothetical
           protein W01G7.5 protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 199 TTHNPGTVEVSGFLGASKTLG 137
           TTH P T + SG+ G  K  G
Sbjct: 348 TTHRPKTADFSGYWGVLKAAG 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,999,791
Number of Sequences: 27780
Number of extensions: 126708
Number of successful extensions: 447
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)