Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28d12
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   1e-04
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.26 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.34 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   4.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   7.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   7.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.9 bits (79), Expect = 1e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
           +RIVGG+       P +AG+      G   ICGA++++    +TAAHC
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHC 204


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 260  HSSVRSQVQQDGGEHQRWRQNHPQSWYRRSQR 165
            HSS ++Q QQ   + Q+ +Q  PQ   ++ Q+
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQ 1526


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 232 CWTCDRTDEWQNFH 273
           CW CD+ +E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 232 CWTCDRTDEWQ 264
           CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 88  CHDHGRQRHQYCCEDLHGYYQFTGSLEV 5
           C  +     + C E+  GY Q+   LEV
Sbjct: 153 CSTYQSNGEEVCLENCTGYQQYLRLLEV 180


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +1

Query: 193 GWFCRQRW 216
           GW C  RW
Sbjct: 377 GWICEHRW 384


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = +3

Query: 63  WRWRPWSWQKR 95
           W W P  W +R
Sbjct: 176 WIWTPHGWMRR 186


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 216 PALAAEPPTILVPS 175
           P +  EPP IL+P+
Sbjct: 330 PFVPVEPPDILMPA 343


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = -1

Query: 287 RKLRRWKFCHSSVRSQVQQDGGEHQ 213
           R  +R   CHS       +DG  ++
Sbjct: 222 RSFQRTSSCHSRYEDSRHEDGNSYR 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,240
Number of Sequences: 438
Number of extensions: 1485
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)