Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28d05
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.11
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 30 1.00
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.00
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 1.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 1.3
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 29 1.3
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 29 1.3
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 29 2.3
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 28 3.1
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 3.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 3.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 28 3.1
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 28 4.0
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 5.3
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 27 7.0
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 9.3
AF036702-10|AAU05573.1| 164|Caenorhabditis elegans Hypothetical... 27 9.3
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 297 PTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPQGR 449
PTT P TA + TT + P +TT T ++TT +T T+ + +
Sbjct: 209 PTTQPLVTSTAPEVTTTVAQTTTAPIVTTANTTTQGVTTTAGVTTTVTRAQ 259
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.9 bits (64), Expect = 1.00
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 297 PTTDPKGQETATNLLTTARTS---LILPKITTLMETATNLSTTVHITWT---LPQGRPYF 458
PTT T T + T +T+ + PK TT + T T +TTV T T PQG F
Sbjct: 161 PTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLF 218
Query: 459 KPT 467
+PT
Sbjct: 219 EPT 221
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.00
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +3
Query: 285 T*TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPQ 443
T T PTT P T T TTA+T+ K TT T ++T T T P+
Sbjct: 272 TTTTPTTTPTTTTTPTTTTTTAKTT----KSTTTTTKTTKTTSTPTTTTTTPK 320
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 329 YEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPPRPTLLQA 463
Y +NRP+ V PP P + G PI + A PPP P L A
Sbjct: 598 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 643
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 329 YEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPPRPTLLQA 463
Y +NRP+ V PP P + G PI + A PPP P L A
Sbjct: 424 YGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 469
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 362 NPPKDYNPNGNGYEPIDNGAYYVDPPPRP 448
NPP Y G G+ P G+ + PPP P
Sbjct: 57 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 85
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 362 NPPKDYNPNGNGYEPIDNGAYYVDPPPRP 448
NPP Y G G+ P G+ + PPP P
Sbjct: 62 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 90
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 329 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPPP 442
Y P PY PP +N G+G GAY+ PPP
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPP 46
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 329 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPPP 442
Y P PY PP +N G+G GAY+ PPP
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPP 46
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +3
Query: 291 TGPTTDPKGQETATNLLTTARTSLILPKITTLME--TATNLSTTVHITWTLPQGRPYFKP 464
T PT DP T T TT + ++TT E T T TT T T P
Sbjct: 26 TSPTADP--TTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTT 83
Query: 465 TPFP 476
T P
Sbjct: 84 TTTP 87
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +3
Query: 276 DLRT*TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP 440
++ T T P T T T TT+ T+ P TT T STT T T P
Sbjct: 51 EVTTTTEPVTT---TTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 3.1
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = +3
Query: 204 SSRTRILAFLGP*SVNPDTCQ*VLDLRT*TGPTTDPKGQETATNLLTTARTSLILPKITT 383
SS T A + P +P T V + T T PTT T T TT +T+ P +TT
Sbjct: 658 SSTTAPTAPVNP--TSPTTAPTVPPVTT-TTPTTTTSTTTTTTTTTTTTQTTPTTPVVTT 714
Query: 384 LMETATNLSTTVHITWTLPQGRPYFKPT 467
T T + V + P +P PT
Sbjct: 715 -PSTITPTTRPVTQPASQPATQPATTPT 741
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 3.1
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = +3
Query: 204 SSRTRILAFLGP*SVNPDTCQ*VLDLRT*TGPTTDPKGQETATNLLTTARTSLILPKITT 383
SS T A + P +P T V + T T PTT T T TT +T+ P +TT
Sbjct: 714 SSTTAPTAPVNP--TSPTTAPTVPPVTT-TTPTTTTSTTTTTTTTTTTTQTTPTTPVVTT 770
Query: 384 LMETATNLSTTVHITWTLPQGRPYFKPT 467
T T + V + P +P PT
Sbjct: 771 -PSTITPTTRPVTQPASQPATQPATTPT 797
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 3.1
Identities = 28/88 (31%), Positives = 37/88 (42%)
Frame = +3
Query: 204 SSRTRILAFLGP*SVNPDTCQ*VLDLRT*TGPTTDPKGQETATNLLTTARTSLILPKITT 383
SS T A + P +P T V + T T PTT T T TT +T+ P +TT
Sbjct: 537 SSTTAPTAPVNP--TSPTTAPTVPPVTT-TTPTTTTSTTTTTTTTTTTTQTTPTTPVVTT 593
Query: 384 LMETATNLSTTVHITWTLPQGRPYFKPT 467
T T + V + P +P PT
Sbjct: 594 -PSTITPTTRPVTQPASQPATQPATTPT 620
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 321 ETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPQG 446
E T ++TT TS + K+ M AT + WTL G
Sbjct: 51 EETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTLELG 92
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 332 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 418
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 442 WGRVHVICTVVDRFVAVSIRVVIFGRIND 356
W VH +C V+ + I++V+F ND
Sbjct: 9 WRYVHPLCAVLANYFVFLIQLVLFAHAND 37
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 332 EPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPPRPT 451
EP + I+ PP Y + + I +GAY + PPP+P+
Sbjct: 202 EPSPVQTSILKPPPMYPETASFPHRKIRSGAYSLYPPPQPS 242
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 291 TGPTTDPKGQETATNLLTTARTSLILPKITTLMETATNLSTTVHIT 428
T PTT T T + TT ++ P T+ T + +TT+ T
Sbjct: 299 TEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTT 344
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 327 ATNLLTTARTSLILPKI---TTLMETATNLSTTVHITWTLPQG 446
A N+ TT T+ I P TT++ T T ++TT +P G
Sbjct: 36 APNITTTTTTTTIAPPTNTTTTILTTTTTVTTTTTSPPLIPDG 78
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 335 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPPR-PTLLQAYP 469
P+D PY Y+P Y P A +PPP+ PT P
Sbjct: 285 PVDPTPYAPASAPVYSPPRTTYVPRSTSAAPPNPPPQNPTAAPYVP 330
>AF036702-10|AAU05573.1| 164|Caenorhabditis elegans Hypothetical
protein F33D4.8 protein.
Length = 164
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/66 (19%), Positives = 30/66 (45%)
Frame = -1
Query: 382 VVIFGRINDVRAVVNRFVAVSWPLGSVVGPVYVRRSSTYWHVSGLTDYGPRKARIRVRDE 203
+++ R ++ NR +++ + + VR+S WH L ++ + + +DE
Sbjct: 21 MLLKNRAGKTKSTSNRTQLLTYEMAQKPHHIGVRKSWLTWHSQNLEEFRQSQPLVVAQDE 80
Query: 202 NVTRMV 185
V R +
Sbjct: 81 VVRRFI 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,523,157
Number of Sequences: 27780
Number of extensions: 218446
Number of successful extensions: 661
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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