Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28c23
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058300-1|AAL13529.1|  959|Drosophila melanogaster GH06271p pro...    91   8e-19
AF319948-1|AAK52669.1|  959|Drosophila melanogaster MMS19 protein.     91   8e-19
AE014297-196|AAN13264.1|  959|Drosophila melanogaster CG12005-PB...    91   8e-19

>AY058300-1|AAL13529.1|  959|Drosophila melanogaster GH06271p
           protein.
          Length = 959

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 42/127 (33%), Positives = 68/127 (53%)
 Frame = +1

Query: 145 VVTDIITQHIDLITLVENMEGILTNKEPESREKGMRFFTKILTELPRDYLTVSQVKFISK 324
           +  D+  +  D+  L E +   L++ + E R  G    + +L  LP+D L   Q++F+S 
Sbjct: 26  IAKDLTAKAYDISALAEALGFALSSPDMEERVAGTNLLSAVLIALPQDLLQERQLEFLST 85

Query: 325 FYIDRLKDNHRVIPAVLQGFSAIIEMKNYDMETSGEFFSLLFREVNCQSQTRQDRYNIYF 504
           FY+DRL+D+H V+PA++ G  A++ MK        +     F    CQSQTR DR  ++ 
Sbjct: 86  FYMDRLRDHHNVMPAIIDGIDALVHMKALPRAQIPQILQSFFEHTTCQSQTRSDRTKLFH 145

Query: 505 IVKKLME 525
           I + L E
Sbjct: 146 IFQYLTE 152


>AF319948-1|AAK52669.1|  959|Drosophila melanogaster MMS19 protein.
          Length = 959

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 42/127 (33%), Positives = 68/127 (53%)
 Frame = +1

Query: 145 VVTDIITQHIDLITLVENMEGILTNKEPESREKGMRFFTKILTELPRDYLTVSQVKFISK 324
           +  D+  +  D+  L E +   L++ + E R  G    + +L  LP+D L   Q++F+S 
Sbjct: 26  IAKDLTAKAYDISALAEALGFALSSPDMEERVAGTNLLSAVLIALPQDLLQERQLEFLST 85

Query: 325 FYIDRLKDNHRVIPAVLQGFSAIIEMKNYDMETSGEFFSLLFREVNCQSQTRQDRYNIYF 504
           FY+DRL+D+H V+PA++ G  A++ MK        +     F    CQSQTR DR  ++ 
Sbjct: 86  FYMDRLRDHHNVMPAIIDGIDALVHMKALPRAQIPQILQSFFEHTTCQSQTRSDRTKLFH 145

Query: 505 IVKKLME 525
           I + L E
Sbjct: 146 IFQYLTE 152


>AE014297-196|AAN13264.1|  959|Drosophila melanogaster CG12005-PB
           protein.
          Length = 959

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 42/127 (33%), Positives = 68/127 (53%)
 Frame = +1

Query: 145 VVTDIITQHIDLITLVENMEGILTNKEPESREKGMRFFTKILTELPRDYLTVSQVKFISK 324
           +  D+  +  D+  L E +   L++ + E R  G    + +L  LP+D L   Q++F+S 
Sbjct: 26  IAKDLTAKAYDISALAEALGFALSSPDMEERVAGTNLLSAVLIALPQDLLQERQLEFLST 85

Query: 325 FYIDRLKDNHRVIPAVLQGFSAIIEMKNYDMETSGEFFSLLFREVNCQSQTRQDRYNIYF 504
           FY+DRL+D+H V+PA++ G  A++ MK        +     F    CQSQTR DR  ++ 
Sbjct: 86  FYMDRLRDHHNVMPAIIDGIDALVHMKALPRAQIPQILQSFFEHTTCQSQTRSDRTKLFH 145

Query: 505 IVKKLME 525
           I + L E
Sbjct: 146 IFQYLTE 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,454,981
Number of Sequences: 53049
Number of extensions: 335732
Number of successful extensions: 637
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)