Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28c22
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    46   3e-05
AE014134-456|AAF51219.1|  521|Drosophila melanogaster CG2843-PA ...    29   3.9  
U15735-1|AAA62152.1|  190|Drosophila melanogaster DrosNCa protein.     27   9.1  
AY071612-1|AAL49234.1|  190|Drosophila melanogaster RE66104p pro...    27   9.1  
AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p pro...    27   9.1  
AE014296-3263|AAF49082.1|  190|Drosophila melanogaster CG7641-PA...    27   9.1  
AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA...    27   9.1  

>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
 Frame = +1

Query: 193 WMFVYKKLQEKEIFS----RRKIQEVDDSFFEKFGSILKQASQRAALEESTPLAPLKEI- 357
           W   + KLQE ++        ++Q+ DD FFEKFGS+L+Q SQ       + LAPL+E  
Sbjct: 7   WKGFFFKLQELKMNPPTEHEHQLQDGDDGFFEKFGSLLRQKSQIDEGVLKSSLAPLEENG 66

Query: 358 ---EEDDNEQKIGA-ELRSELRTVTRDTDSGNETL 450
              EED +E   G  +L  +    + DT +   TL
Sbjct: 67  SGGEEDSDESPDGTLQLSQDSECTSIDTFATESTL 101


>AE014134-456|AAF51219.1|  521|Drosophila melanogaster CG2843-PA
           protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = +1

Query: 160 VNMQKKRLDDPWMFVYKKLQEKEIFSRRKIQEVDDSFFEKFGSILKQASQRAALE 324
           V++Q+K L+DP M +    +++E+ SRRK+ E +    ++   ILK   ++ A E
Sbjct: 146 VDIQRKTLEDPLMLI----KQREMESRRKLLE-NPVKLKEIHRILKTEQEQKAAE 195


>U15735-1|AAA62152.1|  190|Drosophila melanogaster DrosNCa protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +1

Query: 94  HSFCI*HSDNEVSILLKIFVCFVNMQKK-RLDDP--WMFVYKKLQEKEIFSRRKIQEVDD 264
           H F    ++ + +I  + F+C +++  + +L+    W F    L      SR+++ E+  
Sbjct: 67  HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVT 126

Query: 265 SFFEKFGSILKQASQRAALEEST 333
           + ++  GS++K     +  E+ T
Sbjct: 127 AIYKMVGSVMKMPEDESTPEKRT 149


>AY071612-1|AAL49234.1|  190|Drosophila melanogaster RE66104p
           protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +1

Query: 94  HSFCI*HSDNEVSILLKIFVCFVNMQKK-RLDDP--WMFVYKKLQEKEIFSRRKIQEVDD 264
           H F    ++ + +I  + F+C +++  + +L+    W F    L      SR+++ E+  
Sbjct: 67  HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVT 126

Query: 265 SFFEKFGSILKQASQRAALEEST 333
           + ++  GS++K     +  E+ T
Sbjct: 127 AIYKMVGSVMKMPEDESTPEKRT 149


>AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p
           protein.
          Length = 627

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 132 YFAKDIRMFREYAEETFRRSVDVCVQEASRERNL*QTKNTRSR*QLFREIRLN 290
           Y  KDIR     +     R   +  ++++R+R +   +N + R  LF EI+L+
Sbjct: 63  YHTKDIRFLLHESIVWTLRDYKIFAKKSNRDRAIKDFRNLKRRLALFPEIKLD 115


>AE014296-3263|AAF49082.1|  190|Drosophila melanogaster CG7641-PA
           protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/83 (20%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +1

Query: 94  HSFCI*HSDNEVSILLKIFVCFVNMQKK-RLDDP--WMFVYKKLQEKEIFSRRKIQEVDD 264
           H F    ++ + +I  + F+C +++  + +L+    W F    L      SR+++ E+  
Sbjct: 67  HVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVT 126

Query: 265 SFFEKFGSILKQASQRAALEEST 333
           + ++  GS++K     +  E+ T
Sbjct: 127 AIYKMVGSVMKMPEDESTPEKRT 149


>AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA
           protein.
          Length = 627

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 132 YFAKDIRMFREYAEETFRRSVDVCVQEASRERNL*QTKNTRSR*QLFREIRLN 290
           Y  KDIR     +     R   +  ++++R+R +   +N + R  LF EI+L+
Sbjct: 63  YHTKDIRFLLHESIVWTLRDYKIFAKKSNRDRAIKDFRNLKRRLALFPEIKLD 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,038,311
Number of Sequences: 53049
Number of extensions: 307933
Number of successful extensions: 905
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)