Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28c10
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    27   0.15 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.45 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   1.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 436 DTLRCLALATADNPLKPDEMDL 501
           DTLR +A     NPL PD +DL
Sbjct: 900 DTLRKIAQNRGTNPLAPDAVDL 921


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 264 TPQTL-APRQRTQTICQGSTRRCTRTLHTRSRRHQQGSSDHDPEE 395
           TP  + A    T  +  G+T   TR L  R +   +G+ D D +E
Sbjct: 240 TPSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDDE 284


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 SSSLVTGNLCRHTAHPSNPR 280
           +S LV   +C  TAH ++PR
Sbjct: 155 TSLLVVAEVCYFTAHVTHPR 174


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 429 STVLAGQVQDAVLQGRG 379
           S+V +GQ Q +VLQG G
Sbjct: 820 SSVQSGQQQQSVLQGLG 836


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 194 RPSGRKNSLSSSLVTGNLCRHTAHPSNPRASATDPNYL 307
           R + R  + S +L+   LC    H   P  S   PN L
Sbjct: 279 RSTERMIAASVNLICHILCMSDLHWQLPHNSTNPPNIL 316


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 321 RRCTRTLHTRSRRHQQGSSDHDPEEPHLGPDPPVRYWSR 437
           R C+R      ++ ++    H+ EE HL      R +SR
Sbjct: 251 RSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSR 289


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 52  EFKQAFEKVGEATETALIVLAEKMNP 129
           E K+ FEK G+      +  A++M P
Sbjct: 184 EAKRRFEKYGQLFMEETLKAAKRMRP 209


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = +1

Query: 175 VVRQEIETKWKKEFTLEFSRDRKSMSTYCTPLKPSRLGNGPKL 303
           +  +++  + K+ F+ +       M    TP+ PSR  + P +
Sbjct: 502 IFAEKLRLETKELFSSQQKTKNNLMKLETTPVLPSRFQSHPSI 544


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 367 KVPLTTTLKNRILDLTRQYGTGRDT 441
           ++P    +KN   D T+ Y TG  T
Sbjct: 208 ELPQLQLVKNYTADCTQVYSTGNFT 232


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 189 FLTHNNSRGSAI*ASLRNIEGIHF 118
           +  H     S+I   L NIEG H+
Sbjct: 271 YYPHVPEYSSSIIMELHNIEGTHY 294


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 189 FLTHNNSRGSAI*ASLRNIEGIHF 118
           +  H     S+I   L NIEG H+
Sbjct: 286 YYPHVPEYSSSIIMELHNIEGTHY 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,035
Number of Sequences: 438
Number of extensions: 3234
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)