Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28c09
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 67 2e-12
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 53 3e-08
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 53 3e-08
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 51 1e-07
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 47 3e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 45 1e-05
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 44 2e-05
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 43 5e-05
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 43 5e-05
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 36 0.007
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 35 0.012
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 31 0.15
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 29 0.61
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 29 0.81
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 1.1
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.5
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 3.3
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 3.3
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces... 26 5.7
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 25 7.5
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 9.9
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 66.9 bits (156), Expect = 2e-12
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFK-LEKHLNTTYGDGK 196
MS ++ K +++TG ++GIG S I AK IL S + + K L + Y +
Sbjct: 1 MSRLDGKTILITGASSGIGK-STAFEIAKVAKVKLILAARRFSTVEEIAKELESKY-EVS 58
Query: 197 VKFYKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINVT-ALVM 373
V K DVS + G + IDV++NNA ++L G +++D+N+ A+ M
Sbjct: 59 VLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLAL-----GTDKVIDLNIDDAVTM 113
Query: 374 STLKAIEIMRVDK-------TGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCI 532
T + +M + + + G I+N+ SIA + + VYC TKSA+ QF++ +
Sbjct: 114 ITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGS-VYCSTKSALAQFTSAL 172
Query: 533 GKQEYFSKTGVRVITVCYGPTDTD 604
K+ T +R++ V G +T+
Sbjct: 173 RKETI--DTRIRIMEVDPGLVETE 194
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 53.2 bits (122), Expect = 3e-08
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 29 VNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKFY 208
V ++V++TG A GIG ++F E + + ID + K++ D +
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDR---VAGIDIVDPSKVQ--------DAALAL- 50
Query: 209 KCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGI-RRLVDINVTALVMST-- 379
+ DVS DQ+ A KV+ + G IDV++NNA ++ + E + D +V+ ++
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYL 110
Query: 380 LKAIEIMRVDKTGKGGTIINISSI 451
+ I + K GKGG+I+NI S+
Sbjct: 111 TQRYVIPHMAKQGKGGSIVNIGSV 134
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 53.2 bits (122), Expect = 3e-08
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDT--ISGFKLEKHLNTTYGDG 193
M+E +K++++TG + GIG + E ++ +AK +A+ T + ++ + + G
Sbjct: 1 MAETAEKVILLTGSSKGIGLATAEA-LQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKG 59
Query: 194 KV-KFYKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINVTALV 370
V + K + + FG + V+ + G ++ + A + + R+L DIN ++V
Sbjct: 60 DVTEVGKASIETAIKKFGKLDSVILNAGVLEPIAKIA----DADINEWRKLFDINFFSVV 115
Query: 371 MSTLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQE 544
+ AI +R K GTI+ +SS AA++ F P+ YC +K+A+ +G +E
Sbjct: 116 ETVKYAIPHLRKTK----GTIVIVSSGAAVRVF-PAWAAYCCSKAAINMLVMNLGSEE 168
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 51.2 bits (117), Expect = 1e-07
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Frame = +2
Query: 44 VIVTGGANGIGAFSVEVFIENQAKHVAILDI-DTISGFKLEKHLNTTYGDGKVKFYKCDV 220
V++TG + G+G V+V + +A DTI T K+ K DV
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTI-----------TIEHSKLLKLKLDV 56
Query: 221 SIDDQLFGAFNKVLDSHGYIDVVVNNAAVSL-----ENSLEGIRRLVDINVTALVMSTLK 385
+ + AF G +D+V+NNA L ++E + R +++N + T +
Sbjct: 57 TDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKE 116
Query: 386 AIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGV 565
A+ +MR ++GKGG I+ ISS+A P + +Y +K AV S I +E +
Sbjct: 117 ALNLMR--ESGKGGRILQISSVAGYYP-SPCLSMYNASKFAVEGLSQTI-MRELDPNWNI 172
Query: 566 RVITVCYGPTDTDLVPADDQYR*QH 640
+ V G T+ ++ Q+ H
Sbjct: 173 AITIVQPGGMQTEWASSNMQWAKPH 197
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 46.8 bits (106), Expect = 3e-06
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 8/212 (3%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKV 199
M + K ++TGG+ GIG FS+ +V +L + L +G +
Sbjct: 4 MFSLKGKTTLITGGSGGIG-FSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHG-VQA 61
Query: 200 KFYKCDVSIDDQLFGAFNKVLDS-HGYIDVVVNNAAV-----SLENSLEGI-RRLVDINV 358
K Y C + + N+ ++ G +DV++ NA + SLE+ E I ++V IN+
Sbjct: 62 KAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINL 121
Query: 359 TALVMSTLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGK 538
+ A + K GKG I S + + Y TK+AV + +
Sbjct: 122 NGAYYTAQAAGHHFK--KQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAV 179
Query: 539 QEYFSKTGVRVITVCYGPTDTDL-VPADDQYR 631
+ RV +V G DTDL + AD+ R
Sbjct: 180 E---WAPFARVNSVSPGYIDTDLTLYADENLR 208
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 44.8 bits (101), Expect = 1e-05
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Frame = +2
Query: 35 DKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKFYKC 214
+K ++TGG +GIG + +F + V + ++ + L G ++
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRN-CWIWEG 100
Query: 215 DVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVS-LENSLEGIR-RLVDINVTALVMSTLKA 388
+ D + L G+IDV+VNN A + S+E I D+ + S
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWV 160
Query: 389 IEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVR 568
+ + G +I+N SSI A P + Y TK A+ F+ + Q +++ G+R
Sbjct: 161 TKAA-ISHMKSGSSIVNCSSINAYVGR-PDLLDYTSTKGAITAFTRGLSNQ--YAQHGIR 216
Query: 569 VITVCYGPTDTDLV 610
V V GP T LV
Sbjct: 217 VNAVAPGPIYTPLV 230
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 44.0 bits (99), Expect = 2e-05
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Frame = +2
Query: 38 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKFY--K 211
K +V GGA GIG VF E A A + +T G K K + G VK Y K
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEAGAN--AFIVYNTTPGEKAAKEIAQANG---VKTYTCK 76
Query: 212 CDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV-----SLENSLEGIRRLVDINVTALVMS 376
CDV+I ++ AF ++ ID+VV N + +++ + E +++N+ +
Sbjct: 77 CDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNV 136
Query: 377 TLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQ 517
A I + K G G + S + Y +K+ V+Q
Sbjct: 137 AHNAGPIFQ--KQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQ 181
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 42.7 bits (96), Expect = 5e-05
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +2
Query: 215 DVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINV-TALVMSTLKAI 391
DV+ + + K + G IDV++NNA S+ + LE N+ V L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 392 E-IMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVR 568
+ I + ++ G IIN+SSI F P +Y GTK A+ S + + GV+
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTF-PLGCLYYGTKYAIEGISEALTWE--MQSIGVK 138
Query: 569 VITVCYGPTDTD 604
V + G T T+
Sbjct: 139 VKIIEPGFTATE 150
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 42.7 bits (96), Expect = 5e-05
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +2
Query: 215 DVSIDDQLFGAFNKVLDSHGYIDVVVNNAAVSLENSLEGIRRLVDINV-TALVMSTLKAI 391
DV+ + + K + G IDV++NNA S+ + LE N+ V L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 392 E-IMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVR 568
+ I + ++ G IIN+SSI F P +Y GTK A+ S + + GV+
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTF-PLGCLYYGTKYAIEGISEALTWE--MQSIGVK 138
Query: 569 VITVCYGPTDTD 604
V + G T T+
Sbjct: 139 VKIIEPGFTATE 150
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 35.5 bits (78), Expect = 0.007
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Frame = +2
Query: 44 VIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKV-KFYKCDV 220
V++TGG++G+G +++ +Q H I G + E HL T V K + +
Sbjct: 4 VLITGGSSGLGKRIAQIW--SQKGHQC-----HIVG-RNEFHLKETLQSLSVAKGQQHTL 55
Query: 221 SIDDQLFGAFN-KVLDSHGYIDVVVNNAAVSLENSL------EGIRRLVDIN-VTALVMS 376
+I D N K + ID VV+ A V L++SL + I ++ N V+A+ +S
Sbjct: 56 TIADVQSDMKNLKSIFESVEIDTVVHAAGV-LQSSLCVRTSEKEIDSIICTNLVSAIKLS 114
Query: 377 TLKAIEIMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSK 556
+ +E R + + I+NISS + P VY +K+ + F+ + E SK
Sbjct: 115 KMAILEWFRNKNSERDRLILNISSRLSTYAL-PGTSVYAASKAGLESFTKVLA-AEVASK 172
Query: 557 TGVRVITVCYGPTDTDLV 610
G+RV + G DT ++
Sbjct: 173 -GIRVNAISPGYVDTPML 189
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 34.7 bits (76), Expect = 0.012
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Frame = +2
Query: 26 EVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGDGKVKF 205
++ K+ +VTG + GIG + AK V + + K+ K ++ K++F
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRF 97
Query: 206 YKCDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV---SLENSLEGIRRLVDINVTALVMS 376
+ D+ + ++ A + + ++VNNA + E + +G + N + +
Sbjct: 98 LRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHYLF 157
Query: 377 TLKAIEIMR--VDKTGKGGT-IINISSIAALK 463
T + +R ++ G I++++SIA L+
Sbjct: 158 TELLLPTLRRTAEECRPGDVRIVHVASIAYLQ 189
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 20 MSEVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHLNTTYGD 190
M + + VIV G G+G++ + + + + + I+D D +S L +H T D
Sbjct: 121 MERLRNSFVIVVG-CGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRHSIATLQD 176
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 29.1 bits (62), Expect = 0.61
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 154 ESGNCVDVQDGNM----LGLIFNKYFNTKRTDAISTARNNY 44
E+G +D DG + LGL+ NK + TKR + +T+ NY
Sbjct: 517 ENGIVMDDGDGTLPILALGLVCNKVWQTKRFNPANTSITNY 557
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.7 bits (61), Expect = 0.81
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 26 EVNDKIVIVTGGANGIGAFSVEVFIENQAKHVAIL 130
++N +V+VTGG++GIG VE A+ V +L
Sbjct: 72 KMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +2
Query: 395 IMRVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQFSNCIGKQEYFSKTGVRVI 574
I +D + GT+ S+ +K + + VY G+ + +C+ Q+ F TG
Sbjct: 335 ITSLDFSHPFGTLATASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQDSFIATGSMDT 394
Query: 575 TVCYGPTDTDLVPADD 622
TV D D++ D+
Sbjct: 395 TVRLWNLDNDVLHKDN 410
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 38 KIVIVTGGANGIGAFSVEVFIENQAKHVAILDIDTI 145
K+++V GA GIG ++ + + K V I+D+DTI
Sbjct: 27 KVLLV--GAGGIGCELLKNLLMSGVKEVHIIDLDTI 60
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 401 RVDKTGKGGTIINISSIAALKQFCPSVFVYCGTKSAVLQ-FSNCIGKQEYFSKTGVRVIT 577
++DK +G I NISS+ + F S F + +L F + F VRV
Sbjct: 746 KIDKDDEGFAITNISSVHKMPSFVLSYFSDLAASNRILTGFDRVLQLLPSFYDIPVRVRN 805
Query: 578 VCY 586
V Y
Sbjct: 806 VQY 808
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 140 TISGFKLEKH-LNTTYGDGKVKFYKCDVSIDDQLFGAFNKVL 262
TIS ++ K L T KV +C++ +DD L +NKVL
Sbjct: 1422 TISADEVGKFILEATSPTVKVSSPRCELHLDDLLSAQYNKVL 1463
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 212 CDVSIDDQLFGAFNKVLDSHGYIDVVVNNAAV 307
CD+SI L FNKV D Y ++ NNA V
Sbjct: 311 CDLSIFLSLLPIFNKVQDRMRY-SLLTNNAIV 341
>SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.8 bits (54), Expect = 5.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 530 IGKQEYFSKTGVRVITVCY 586
+G E++ + VRVI VCY
Sbjct: 90 VGMNEFYYQVAVRVIEVCY 108
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 68 GIGAFSVEVFIENQAKHVAILDIDTISGFKLEKHL 172
G+G E+ N+A+ +A+ D + GF+ HL
Sbjct: 602 GVGPELSELKYTNRAEFIAVTDAQCLEGFRALCHL 636
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -2
Query: 365 RR*HLCQLVFEYLQENFPTKQQR-YSQLHQYN 273
R+ +L FE+L++NF + QR YS++ ++N
Sbjct: 350 RKPNLQTYFFEFLKKNFCDENQRFYSEVCEFN 381
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,633,167
Number of Sequences: 5004
Number of extensions: 54284
Number of successful extensions: 171
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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