Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28c02
(529 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 36 0.001
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 30 0.042
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 25 1.6
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 4.8
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 4.8
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 8.4
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 23 8.4
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 35.5 bits (78), Expect = 0.001
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 228 VTFFNNSITNITQLSPIPGNRIAI-SFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQV 404
V NN ++ + + N +A+ S NR+ I+ A RN L L L+ NK
Sbjct: 386 VILSNNRLSTVDHFTFSGLNSLALLSLDYNRISRIDRQALRNHSALQELHLNGNK----- 440
Query: 405 LRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKY 524
+ Q P D +Y L TL+LG N I ++D F++
Sbjct: 441 ----LLQVP--DALYDVPLLRTLDLGENHISNIDNASFRH 474
Score = 27.5 bits (58), Expect = 0.29
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQG 428
I ++N + + F ++ +L+ LDLSNN+++ + + F G
Sbjct: 287 IYLQNNSLNVLAPGIFSDLKQLLVLDLSNNELTSEWINPATFPG 330
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 30.3 bits (65), Expect = 0.042
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 327 IEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEI 494
+ D F + RLV L+L++NKI+ L SEIF Y L+ LNL +N++
Sbjct: 359 VNRDTFAGLIRLVLLNLASNKIT--KLESEIFSDLY--------TLQILNLRHNQL 404
Score = 26.6 bits (56), Expect = 0.51
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 147 NCSR-RDIVKIPNWPEQINNISKDGHVL--VTFFNNSITNITQLSPIPGNRI-AISFKSN 314
NCS +D+ N Q+ KD +L V NSI+ I + N + + SN
Sbjct: 462 NCSSLQDLNLNGNELTQVPLALKDMRLLRTVDLGENSISVIEEPGFRGMNNLYGLRLISN 521
Query: 315 RVIEIEDDAFRNIPRLVYLDLSNNKIS 395
+ AF+++P L L+++ NKIS
Sbjct: 522 NIENFTRKAFKDLPSLQILNVARNKIS 548
Score = 25.8 bits (54), Expect = 0.90
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 321 IEIEDDAFRNIPRLVYLDLSNNKI 392
+EIE DAF L LDLS N I
Sbjct: 160 LEIEADAFGQTRNLEVLDLSTNNI 183
Score = 25.4 bits (53), Expect = 1.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGP 431
+ N + + D A + L LDLS+NK+ L +++F+ P
Sbjct: 274 LKIHDNEISMVGDKALSGLNELQILDLSSNKL--VALPTDLFRDP 316
Score = 25.4 bits (53), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 306 KSNRVIEIEDDAFRNIPRLVYLDLSNNKIS 395
+ NR+ IED F + +L L L N+I+
Sbjct: 907 QGNRIAYIEDHTFAELRKLEVLRLDGNRIT 936
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 321 IEIEDDAFRNIPRLVYLDLSNNKISGQ 401
+++ D F + LV+LDLSN ++ Q
Sbjct: 72 VDLHQDIFFPLISLVFLDLSNTRLEYQ 98
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.4 bits (48), Expect = 4.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 200 QHKQRWSRPSDVFQQQHYKYNATESDTG 283
+HK++W+ SD KYN+ G
Sbjct: 522 KHKEKWTAISDTGVPVDVKYNSHSQSIG 549
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 4.8
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 93 APSAP-CDISVEDTSNLTLNCSRRDIVK 173
+P+ P C +VED ++ +C R D ++
Sbjct: 935 SPNCPECGDAVEDVEHVLFHCPRSDRIR 962
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 22.6 bits (46), Expect = 8.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 197 KQHKQRWSRPSDVFQQQHYKYNATESDTGEQDRDQFQ 307
+QH+QR + QQQ+ ++ + +Q + Q Q
Sbjct: 267 QQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQ 303
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismutase
2 protein.
Length = 211
Score = 22.6 bits (46), Expect = 8.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 516 TNICPMSGSHYNQD*VS 466
T+ C +G HYN D VS
Sbjct: 73 TDGCASTGGHYNPDKVS 89
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,600
Number of Sequences: 2352
Number of extensions: 10093
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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