Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28b24
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   5.1  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         23   5.1  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         23   5.1  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   5.1  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   5.1  
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   6.8  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +1

Query: 259 GKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPP 435
           G   T H+   L    K V  +    AGT  L      T   +  G+GA A+    P P
Sbjct: 363 GASATPHNMPPLGSLCKTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAPATAKPTPKP 421


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +1

Query: 259 GKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPP 435
           G   T H+   L    K V  +    AGT  L      T   +  G+GA A+    P P
Sbjct: 363 GASATPHNMPPLGSLCKTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAPATAKPTPKP 421


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 401 PVPAFASLTVPNTGLPRCSVPAFFGDT 321
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 401 PVPAFASLTVPNTGLPRCSVPAFFGDT 321
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 401 PVPAFASLTVPNTGLPRCSVPAFFGDT 321
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 401 PVPAFASLTVPNTGLPRCSVPAFFGDT 321
           P P   +LT  N G P C+    F DT
Sbjct: 139 PPPCPPTLTTFNGGQPTCAGKLLFEDT 165


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 401 PVPAFASLTVPNTGLPRCSVPAFFGDT 321
           P P   +LT  N G P C+    F DT
Sbjct: 141 PPPCPPTLTTFNGGQPTCAGKLLFEDT 167


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 370 GTVKEAKAGTGATASVIYVPPPG 438
           G  K A+  TGA + V+ V P G
Sbjct: 238 GGGKAAEVSTGAASGVVVVRPEG 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,574
Number of Sequences: 2352
Number of extensions: 10181
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)