Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28b24
(460 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A synth... 132 4e-31
CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein. 132 4e-31
BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein. 132 4e-31
AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein. 132 4e-31
AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase... 131 1e-30
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 31 2.5
AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein. 31 2.5
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 31 2.5
AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb... 31 2.5
Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein. 30 3.3
X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein. 30 3.3
BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b ... 30 3.3
BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b ... 30 3.3
BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b ... 30 3.3
AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein. 30 3.3
J02960-1|AAA88016.1| 251|Homo sapiens unknown protein protein. 29 5.8
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 29 5.8
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 29 5.8
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 29 5.8
>Z68204-1|CAA92426.1| 132|Homo sapiens succinyl coenzyme A
synthetase protein.
Length = 132
Score = 132 bits (320), Expect = 4e-31
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = +1
Query: 193 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 372
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 373 TVKEAKAGTGATASVIYVPPPGAAAAILE 459
TVKEAK TGATASVIYVPPP AAAAI E
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINE 118
>CR457139-1|CAG33420.1| 333|Homo sapiens SUCLG1 protein.
Length = 333
Score = 132 bits (320), Expect = 4e-31
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = +1
Query: 193 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 372
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 373 TVKEAKAGTGATASVIYVPPPGAAAAILE 459
TVKEAK TGATASVIYVPPP AAAAI E
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINE 118
>BC000504-1|AAH00504.1| 333|Homo sapiens SUCLG1 protein protein.
Length = 333
Score = 132 bits (320), Expect = 4e-31
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = +1
Query: 193 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 372
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 373 TVKEAKAGTGATASVIYVPPPGAAAAILE 459
TVKEAK TGATASVIYVPPP AAAAI E
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINE 118
>AC096770-1|AAY24107.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 132 bits (320), Expect = 4e-31
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = +1
Query: 193 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 372
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 373 TVKEAKAGTGATASVIYVPPPGAAAAILE 459
TVKEAK TGATASVIYVPPP AAAAI E
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINE 118
>AF104921-1|AAD17940.2| 333|Homo sapiens succinyl-CoA synthetase
alpha subunit protein.
Length = 333
Score = 131 bits (317), Expect = 1e-30
Identities = 63/89 (70%), Positives = 70/89 (78%)
Frame = +1
Query: 193 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 372
Y +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG P K G HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFN 89
Query: 373 TVKEAKAGTGATASVIYVPPPGAAAAILE 459
TVKEAK TGATASVIYVPPP AAAAI E
Sbjct: 90 TVKEAKEQTGATASVIYVPPPFAAAAINE 118
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 325 SPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGAAAA 450
+P+ A T +G F ++ +A T A+A ++ P P AAA
Sbjct: 69 APQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
>AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 325 SPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGAAAA 450
+P+ A T +G F ++ +A T A+A ++ P P AAA
Sbjct: 69 APQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 325 SPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGAAAA 450
+P+ A T +G F ++ +A T A+A ++ P P AAA
Sbjct: 69 APQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
>AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb
variant protein.
Length = 514
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 325 SPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVPPPGAAAA 450
+P+ A T +G F ++ +A T A+A ++ P P AAA
Sbjct: 105 APQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 146
>Z98744-5|CAB11421.1| 226|Homo sapiens histone 1, H1b protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>X83509-1|CAA58498.1| 226|Homo sapiens Histone H1.5 protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC101583-1|AAI01584.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC101581-1|AAI01582.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>BC069101-1|AAH69101.1| 226|Homo sapiens histone cluster 1, H1b
protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>AF531304-1|AAN06704.1| 226|Homo sapiens histone H1 protein.
Length = 226
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/99 (27%), Positives = 37/99 (37%)
Frame = +1
Query: 133 LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 312
L+ K L G N + +++ T V +G TG G+F + G
Sbjct: 62 LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118
Query: 313 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 429
KKAG KP T K+AK GA +V P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156
>J02960-1|AAA88016.1| 251|Homo sapiens unknown protein protein.
Length = 251
Score = 29.5 bits (63), Expect = 5.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 447 CCSSRGRYINNRGSCSCACLCL 382
C R++ N G C CA LCL
Sbjct: 125 CLGGHSRFLPNVGQCRCAALCL 146
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 370 GTVKEAKAGTGATASVIYVPPPGA 441
GT K ++G G+TA + PPPGA
Sbjct: 555 GTFKAQESGQGSTAGPLRPPPPGA 578
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 370 GTVKEAKAGTGATASVIYVPPPGA 441
GT K ++G G+TA + PPPGA
Sbjct: 400 GTFKAQESGQGSTAGPLRPPPPGA 423
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 370 GTVKEAKAGTGATASVIYVPPPGA 441
GT K ++G G+TA + PPPGA
Sbjct: 398 GTFKAQESGQGSTAGPLRPPPPGA 421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,271,209
Number of Sequences: 237096
Number of extensions: 1579307
Number of successful extensions: 3563
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3557
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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