Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28b23
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 32 0.033
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 32 0.043
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 31 0.100
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 31 0.100
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 29 0.23
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 29 0.31
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 28 0.70
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 1.2
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 27 1.6
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 26 2.2
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 2.2
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 2.8
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 26 2.8
SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces ... 26 2.8
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 5.0
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.0
SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated |Schizosaccharom... 25 6.6
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 25 6.6
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 25 6.6
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 25 6.6
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 24 8.7
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 24 8.7
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 24 8.7
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 24 8.7
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 24 8.7
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 24 8.7
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 24 8.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 8.7
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 24 8.7
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 32.3 bits (70), Expect = 0.033
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 104 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKK 262
K +TV+GGG++G + V ++ G VT+V+ I LSR+ K
Sbjct: 218 KKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGPMDADISKALSRIISK 270
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.043
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 107 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 229
+V +IGGG G+G+A ++ G NV L++ ++ A + KS
Sbjct: 69 DVLIIGGGATGTGVAVDASTRGLNVCLLEKTDFASETSSKS 109
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 30.7 bits (66), Expect = 0.100
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +2
Query: 71 FSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 250
F S NV V+G G + + Q + AG NVT+ S++ L AKK T+
Sbjct: 156 FGSKEHQVKPGNNVLVLGTGGVSTFALQFALAAGANVTVTSSSDEKLEFAKKLGATHTIN 215
Query: 251 VAKKMYKDNPQ 283
YK PQ
Sbjct: 216 -----YKKTPQ 221
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 30.7 bits (66), Expect = 0.100
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 104 KNVTVIGGGL-MGSGIAQVSAQAGQNVTLVDVSNDALAKAKK 226
KN V G +G IA AQAG NV + ++ D KAKK
Sbjct: 22 KNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK 63
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 29.5 bits (63), Expect = 0.23
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 104 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAK 217
KNV VIGGG G A +++ G TL+ S D + +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLLTKSFDNIGQ 54
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 29.1 bits (62), Expect = 0.31
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 59 IVRNFSSSSAM--QSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSI 232
I+RNF SSA+ QS++ NV V GG + ++ A L +V D K K
Sbjct: 581 IIRNFQFSSALKRQSSVSNVRVSGGSFK-TFVSVKGAPEVIATMLREVPKD-YEKIYKDY 638
Query: 233 GTNLSRVAKKMYK 271
G SRV YK
Sbjct: 639 GRKGSRVLALGYK 651
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 0.70
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 116 VIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALA--KAKKSIGTNLSRVAKKMYKDNPQEG 289
VIGGGL G G NV L+D N A K + G N + + +
Sbjct: 43 VIGGGLAGLSATNTILDLGGNVLLLD-KNTAFGGNSVKAASGINAAPTQLQFDQHVSDSV 101
Query: 290 EKFVNDSL 313
F NDS+
Sbjct: 102 NTFYNDSI 109
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 1.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 73 FKFLCNAKCYQECNGYWRWSNGL 141
F F+CNA Y N Y W+ L
Sbjct: 619 FYFVCNATSYSSLNPYGNWARPL 641
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.6 bits (56), Expect = 1.6
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 179 VTLVDVSNDALAKA--KKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEAS 352
+T V + LA+A K I + + K K P+E E F+ L N + E
Sbjct: 861 ITEKSVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKG 920
Query: 353 KSADLVVEAIVENIEVKHKLFKQL 424
+ D + I+ + + +LFKQ+
Sbjct: 921 ELDDDELNEILARGDDELRLFKQM 944
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 26.2 bits (55), Expect = 2.2
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 197 SNDALAK---AKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADL 367
S DA+ K A K+ NL +V+ D P+ F ND + + +T A +K AD
Sbjct: 254 STDAVPKKLDASKASSLNLEKVS--YLTDEPKFRFDFNNDEMAVVKLSTGIAAFAKDADT 311
Query: 368 VVEAIVENIE 397
+ + +E
Sbjct: 312 LRTILKAKLE 321
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 2.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 61 RKKFFKFLCNAKCY 102
RK+FF FL N +CY
Sbjct: 629 RKRFFDFLVNTQCY 642
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.8 bits (54), Expect = 2.8
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 92 QSAIKNVTVI--GGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIG 235
QS ++ +I GGG++G + V+A + + + + LA SIG
Sbjct: 101 QSCTRDTILIAMGGGVIGDLVGYVAASFMRGIRFIQMPTTLLAMVDSSIG 150
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 2.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 242 LSRVAKKMYKDNPQEGEKFV--NDSLGRINTATDAA--EASKSAD 364
+S++A+ NP + E+FV D+LG D+ EAS AD
Sbjct: 102 ISKIAEAAQASNPDDEEEFVMEEDNLGEAPLLVDSESYEASVKAD 146
>SPAC8C9.14 |prr1||transcription factor Prr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 2.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 137 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRV 253
GS + + A + +SND+LAKA S+ T++S++
Sbjct: 317 GSFTTHLDSNASMAKSFSQISNDSLAKA-SSVATSMSQM 354
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 217 SQEEHWHKPQQGRKEDVQR*SPRRREICE 303
+QE+ W K +Q KE+++R RREI E
Sbjct: 19 NQEKVW-KDEQAHKEEMKRVEQLRREIEE 46
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +2
Query: 191 DVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLV 370
++SN + + S+G + + + Y + ++V DS+ R++ A + +D +
Sbjct: 365 EISNLRVLAVENSLGNLIQKAEESNYDQAIMDLFEYVKDSILRVHER--AIKLRTLSDSI 422
Query: 371 VEAIVENIEV 400
+ ENIE+
Sbjct: 423 RADVAENIEM 432
>SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 6.6
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +2
Query: 131 LMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIG-----TNLSRVAKKMYKDNPQEGEK 295
+ G +Q+S Q G + + D S+ K K+++ T L+ + + + P E
Sbjct: 1 MSGRRYSQISQQEGSSSS--DDSDSQQKKTKRTVAHRSPNTTLNGMPRVDSRARPNENSG 58
Query: 296 FVNDSLGRINTATDAAEASKSADLVVEAIVENIEVK 403
S GR++T K ++LV + ++ EV+
Sbjct: 59 QSKSSNGRVDTDRKMDLLRKRSNLVHQTLLLEKEVR 94
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 308 SLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQL 424
SLG +++A D SAD + E + + + H L K L
Sbjct: 430 SLGLVSSALDKITGLLSADNLSETVSQARDFSHTLSKSL 468
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 113 TVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKK 226
T I GGL G+G+AQ++ A N++ + +D +K
Sbjct: 63 TSIIGGLAGNGVAQITTLA-YNLSAIRQRDDGFEILRK 99
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 24.6 bits (51), Expect = 6.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 300 TNFSPSWGLSLYIFF 256
T+ PS+GL LY+FF
Sbjct: 336 TDHGPSYGLYLYLFF 350
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 224 KSIGTNLSRVAKKMYKDNPQEGEKFVNDSL 313
+ +GTNLS KKM + + E VN+ L
Sbjct: 404 RQVGTNLSVAIKKMNINQQPKKEFIVNEIL 433
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 24.2 bits (50), Expect = 8.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 171 PAWADTWAMPEPIRPPPI 118
PA + A+P +RPPP+
Sbjct: 150 PAAGNEQALPSDVRPPPV 167
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 24.2 bits (50), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 53 KVIVRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSA---QAGQNVTLVDV 196
+ I+R+ SS + +Q +T IG G+ S I A A + +VDV
Sbjct: 381 QTIIRSSSSVTPLQLDPSELTAIGSGVQASLIGHFDAADIAASTDAQVVDV 431
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 24.2 bits (50), Expect = 8.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 11 YKPNL*IDSKMMQFKVIVRNFSSSSAMQSAIKNVTVIGGGLMGS 142
Y NL +D M F++ +F + +++ I+N G MG+
Sbjct: 914 YSCNL-LDPNMTIFRIDANSFGALEEVEAFIRNTLCFNFGYMGT 956
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 309 ESFTNFSPSWGLSLYIFFATLLRF 238
+ FT S WGL ++FF LL +
Sbjct: 116 KEFTLASFFWGLCRFVFFPVLLSY 139
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 144 PEPIRPPPITVTFLIALCIAEELEKFL-TITLNCIIFE 34
P+P++P P TV L+ +A + + T C++ E
Sbjct: 289 PQPLQPDPETVIHLVPTVLAGDKSSVVKTCCTRCLLRE 326
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +2
Query: 188 VDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASK 355
V SND L K+ + + NLS V K+ + E+ ++ T+ A+ +
Sbjct: 515 VKKSNDDLQKSSRDVAANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQ 570
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 24.2 bits (50), Expect = 8.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 89 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMY 268
M+S +N +I G G+G + + + Q +T V KS+GT + RV++ +
Sbjct: 120 MKSYHENQCIIISGESGAGKTEAAKRIMQYITHVS----------KSVGTEIERVSEIIL 169
Query: 269 KDNP 280
NP
Sbjct: 170 ATNP 173
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 353 KSADLVVEAIVENIEVKHKLFK 418
KSA+ E +E I +H+LFK
Sbjct: 53 KSAETANEKFIEKINKEHQLFK 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,648,940
Number of Sequences: 5004
Number of extensions: 31724
Number of successful extensions: 103
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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