Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28b23
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 118 2e-27
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 73 9e-14
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 72 2e-13
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 72 2e-13
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 72 2e-13
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 68 3e-12
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 56 8e-09
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.47
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 30 0.62
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 29 1.9
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 29 1.9
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 27 4.4
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical ... 27 4.4
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 27 4.4
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 27 7.7
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 7.7
U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical... 27 7.7
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 27 7.7
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 27 7.7
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 27 7.7
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 27 7.7
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 27 7.7
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 27 7.7
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 118 bits (284), Expect = 2e-27
Identities = 60/117 (51%), Positives = 82/117 (70%)
Frame = +2
Query: 77 SSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVA 256
S++A S I NVT+IG GLMGSGIAQVSA A NVT+VD + AL KA++ I +L RVA
Sbjct: 14 STTAQLSKINNVTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKRVA 73
Query: 257 KKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLD 427
KK + D+ V+ L RI +T+ +++ K ADLV+EAIVENI++K KLF +++
Sbjct: 74 KKKHADDAAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVE 130
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/119 (42%), Positives = 79/119 (66%)
Frame = +2
Query: 71 FSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSR 250
F++ AMQ+ I+NV ++G G MGSGIAQV+A +G NV L DV+ AL +A K+I +++
Sbjct: 2 FTAKCAMQN-IRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTH 60
Query: 251 VAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLD 427
++KK K +E FV ++ RI T + + A ADL++EA +ENI++K +F Q++
Sbjct: 61 LSKKQ-KGTDKEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIE 118
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 72.9 bits (171), Expect = 9e-14
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +2
Query: 110 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEG 289
V + G G+MGSGIAQV QAG V L S L +A+++I NL RVA K D P E
Sbjct: 13 VAIFGAGMMGSGIAQVCLQAGYPVNLYGRSEKKLLEARETIKKNLIRVASKKKTDVPMEP 72
Query: 290 ---EKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQL 424
E+ L + TD A++ A + +EA+ EN+++K +F+ +
Sbjct: 73 AALEEIAQIQLDLLQIHTDIPSAAEDAAMAIEAVAENLDLKLDIFQTI 120
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 71.7 bits (168), Expect = 2e-13
Identities = 37/111 (33%), Positives = 66/111 (59%)
Frame = +2
Query: 101 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 280
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 281 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGV 433
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESV 482
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 71.7 bits (168), Expect = 2e-13
Identities = 37/111 (33%), Positives = 66/111 (59%)
Frame = +2
Query: 101 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 280
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 352 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 410
Query: 281 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGV 433
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V
Sbjct: 411 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESV 456
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 71.7 bits (168), Expect = 2e-13
Identities = 37/111 (33%), Positives = 66/111 (59%)
Frame = +2
Query: 101 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 280
+ + V+G GLMG+GIA V+ G L+D + + + + I T+L++ K+ K N
Sbjct: 378 VNEIAVVGAGLMGAGIANVTIDKGIRTVLLDANPAGVERGQNQIATHLNKQVKRR-KINK 436
Query: 281 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGV 433
E E+ N + I+ + A K+AD+V+EA+ E++++KHK+ KQ++ V
Sbjct: 437 LEKERIYNHLVPTIDYS-----AMKNADVVIEAVFEDLQLKHKVIKQIESV 482
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 68.1 bits (159), Expect = 3e-12
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +2
Query: 101 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 280
+ + V+G G MG+GIA V+ G L+D + + + + + T+L+R K+ K +
Sbjct: 352 VNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQAGVERGQNHVATHLNRQLKRQ-KISK 410
Query: 281 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGV 433
E EK N + I+ + A K+AD+V+EA+ E++ +KHK+ +Q++ V
Sbjct: 411 LEREKIYNHLVPTIDYS-----AMKNADVVIEAVFEDLPLKHKVIRQIENV 456
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 56.4 bits (130), Expect = 8e-09
Identities = 38/111 (34%), Positives = 59/111 (53%)
Frame = +2
Query: 101 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNP 280
IK+V VIGGG MG GIA +G LV+V+N A K + R K + N
Sbjct: 39 IKSVAVIGGGTMGRGIAIAFCLSGFETYLVEVNNKAAEFCKNELEITYKR-EKAFRRLND 97
Query: 281 QEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGV 433
+ EK + + TD + + + DL+VEA+ E++++K +LF +LD +
Sbjct: 98 SKVEKLRKN----LQITTDFQKLN-NCDLIVEAVFEDMKLKKELFTKLDKI 143
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 30.7 bits (66), Expect = 0.47
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 37 ENDAV*SYRKKFFKF-LCNAKCYQECNGYWRWSNGLRHSPGICPSR-TECY 183
EN+ + FF+ + K +Q C+G W ++GL SP +C SR C+
Sbjct: 1123 ENNCHNNGESNFFQCSMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCF 1173
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 30.3 bits (65), Expect = 0.62
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 263 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVEN 391
+Y D+PQ+ ++ LGRI+ AA K+ D+ I+++
Sbjct: 204 IYIDDPQDSKRISGKELGRIHKNKSAAHLDKNGDIPYWKIIKS 246
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD--VSNDALAKAKKSIGTNLSRV 253
KNV ++G G G I AQ +VTL+ + L ++ + + TN+ V
Sbjct: 171 KNVVIVGAGPSGIDITLQIAQTANHVTLISKKATYPVLPESVQQMATNVKSV 222
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 32 DSKMMQFKVIVRNFSSSSAMQS-AIKNVTVIGGGLMGSGIAQV 157
+S + I R F ++S + + + K VT+IG G GS IA++
Sbjct: 11 NSSRLSLSSIFRYFGTTSTIATMSPKKVTIIGSGNWGSAIARI 53
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 185 LVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSA 361
L+D N+ IG +R K M NP G+ ++ G A EA+K A
Sbjct: 17 LIDSPNEQHDPLTNFIGNEFARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEA 75
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 107 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 229
+V +IGGG G+G+A + G LV++ + + + +S
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 107 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 229
+V +IGGG G+G+A + G LV++ + + + +S
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGTSSRS 116
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 107 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAK 217
+V VIGGG G A +A+ G N LV + + + +
Sbjct: 18 DVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIGE 54
>AF067214-9|AAC17004.1| 286|Caenorhabditis elegans Hypothetical
protein F56C3.1 protein.
Length = 286
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 150 PRYLPKQDRMLPWLTSAMMLWLKPRRALAQ 239
PR LPKQD+ TS +M + P+ +AQ
Sbjct: 230 PRLLPKQDQQSSVGTSEVMSPMPPKNTMAQ 259
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 27.5 bits (58), Expect = 4.4
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 137 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLG 316
G+ Q++A Q +L+ +S +A AK + S ++ V K + V+ S G
Sbjct: 681 GAQHGQITAYPRQLESLIRLS-EAHAKIRLSQEVSVDDVEKAFTLWREALKQSAVDPSTG 739
Query: 317 RINTATDAAEASKSADLVVEAIVENI 394
R++ A A+ S S VEA+ E +
Sbjct: 740 RVDVAILASGMSASGRKAVEAMCEAV 765
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 IVRNFSSSSAMQS-AIKNVTVIGGGLMGSGIAQV 157
I R F ++S + + + K VT+IG G GS IA++
Sbjct: 8 IFRYFGTTSTIATMSPKKVTIIGSGNWGSAIARI 41
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 26.6 bits (56), Expect = 7.7
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +2
Query: 131 LMGSG-IAQVSAQAGQNVTLVDVSNDAL---AKAKKSIGTNLSRVAKKM 265
L+ +G IA A+AG NVTL+++ + K+ K + + RV KKM
Sbjct: 36 LISNGRIADELAKAGHNVTLLEIDFLGIVDSTKSAKLVKKTIVRVPKKM 84
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 26.6 bits (56), Expect = 7.7
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 209 LAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSAD-----LVV 373
+AKAK+ + + + + K D FVN + + A AA+ + + D L V
Sbjct: 119 IAKAKRDVYSKVLKAKKLADSDEEDSAASFVNKMRQKEDEAKKAADRAAAFDQLDEELGV 178
Query: 374 EAIVENIEVKHK 409
AIV+ ++ K
Sbjct: 179 SAIVDKVKKPKK 190
>U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical
protein F48E8.3 protein.
Length = 493
Score = 26.6 bits (56), Expect = 7.7
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +2
Query: 110 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDA---LAKAKKSI-GTNLSRVAKKMYKDN 277
V V+GGGL G + G V LV+ + AKA I G K KD+
Sbjct: 11 VVVVGGGLAGLSASLDIINGGGRVILVEGEGNTGGNSAKASSGINGAGTETQEKLGIKDS 70
Query: 278 PQEGEKFVNDSLGRINTATD 337
P E V D+L ++ D
Sbjct: 71 P---ELLVKDTLSAGDSEND 87
>AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical
protein Y50E8A.6 protein.
Length = 609
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 107 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 229
+V VIGGG G+G+A + G +V+ + + KS
Sbjct: 64 DVLVIGGGSAGAGVALDAQTRGLKTAMVEYGDYCSGTSSKS 104
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 290 EKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQL 424
E+ +N L +++T ++ + + + + ++ AI E KHKLF+ L
Sbjct: 214 EEDLNSVLSKMDTFSEKPDKT-NLERIITAITECTTFKHKLFESL 257
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 TLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE 286
TL+ DAL + IG + + KK+ +DNP E
Sbjct: 367 TLILKGVDALEIPNRRIGKTATALVKKLCRDNPGE 401
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 TLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE 286
TL+ DAL + IG + + KK+ +DNP E
Sbjct: 646 TLILKGVDALEIPNRRIGKTATALVKKLCRDNPGE 680
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 TLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE 286
TL+ DAL + IG + + KK+ +DNP E
Sbjct: 640 TLILKGVDALEIPNRRIGKTATALVKKLCRDNPGE 674
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 TLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE 286
TL+ DAL + IG + + KK+ +DNP E
Sbjct: 634 TLILKGVDALEIPNRRIGKTATALVKKLCRDNPGE 668
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 182 TLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQE 286
TL+ DAL + IG + + KK+ +DNP E
Sbjct: 677 TLILKGVDALEIPNRRIGKTATALVKKLCRDNPGE 711
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,165,087
Number of Sequences: 27780
Number of extensions: 189883
Number of successful extensions: 576
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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