Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28b08
         (415 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p pro...    28   5.6  
AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-P...    28   5.6  
AY089401-1|AAL90139.1|  267|Drosophila melanogaster AT22782p pro...    27   9.8  
AE014134-2640|AAF53485.2|  261|Drosophila melanogaster CG31826-P...    27   9.8  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    27   9.8  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    27   9.8  

>AY089413-1|AAL90151.1|   61|Drosophila melanogaster AT23551p
           protein.
          Length = 61

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = +3

Query: 276 VGGIQRACLDPTL---PYCNLGECS--ATPAEG-CEPASGASVAP 392
           VG     CL P +   PYC  G C    +P  G C P  G S  P
Sbjct: 14  VGPCPPGCLAPLMGGTPYCGCGPCGGCCSPCCGPCGPCGGCSSCP 58


>AE014134-2896|AAN11177.1|   61|Drosophila melanogaster CG31740-PA
           protein.
          Length = 61

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = +3

Query: 276 VGGIQRACLDPTL---PYCNLGECS--ATPAEG-CEPASGASVAP 392
           VG     CL P +   PYC  G C    +P  G C P  G S  P
Sbjct: 14  VGPCPPGCLAPLMGGTPYCGCGPCGGCCSPCCGPCGPCGGCSSCP 58


>AY089401-1|AAL90139.1|  267|Drosophila melanogaster AT22782p
           protein.
          Length = 267

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 411 VSNIKRSVLQMHQRPVHILQRG 346
           V N K  VL   QR VHI+QRG
Sbjct: 168 VVNEKNGVLPFSQRIVHIIQRG 189


>AE014134-2640|AAF53485.2|  261|Drosophila melanogaster CG31826-PA
           protein.
          Length = 261

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 411 VSNIKRSVLQMHQRPVHILQRG 346
           V N K  VL   QR VHI+QRG
Sbjct: 161 VVNEKNGVLPFSQRIVHIIQRG 182


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
           isoform B protein.
          Length = 2968

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 CLDCTTKQVCTKVGGIQRACLD 305
           C +C+T   C+   G+ R CLD
Sbjct: 22  CYECSTLDECSAGSGVLRKCLD 43


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
           isoform A protein.
          Length = 2931

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 240 CLDCTTKQVCTKVGGIQRACLD 305
           C +C+T   C+   G+ R CLD
Sbjct: 22  CYECSTLDECSAGSGVLRKCLD 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,907,019
Number of Sequences: 53049
Number of extensions: 404311
Number of successful extensions: 1261
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)