Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28b06
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p pro...    31   1.1  
AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA ...    31   1.1  
AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p pro...    29   4.5  
AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB...    29   4.5  
AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA...    29   4.5  

>AY060992-1|AAL28540.1|  250|Drosophila melanogaster HL01138p
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 113 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 208
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AE014296-706|AAF47802.1|  250|Drosophila melanogaster CG1079-PA
           protein.
          Length = 250

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 113 TRAVNFIDGSIFYIFILCNFLVIVDFCFYYII 208
           T+ V  + G + Y FI+C  L+ +D+C +Y++
Sbjct: 163 TKIVQLLGGQVPY-FIICYILICMDYCKWYVM 193


>AY069413-1|AAL39558.1|  420|Drosophila melanogaster LD11027p
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 436 HITTPCHTCMAFVIVCLRLMTC 371
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-543|AAN10406.1|  420|Drosophila melanogaster CG17257-PB,
           isoform B protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 436 HITTPCHTCMAFVIVCLRLMTC 371
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


>AE014134-542|AAF51157.2|  420|Drosophila melanogaster CG17257-PA,
           isoform A protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 436 HITTPCHTCMAFVIVCLRLMTC 371
           HI   C  C+ F +VC RL+TC
Sbjct: 46  HILGCCCNCVDFDLVCTRLVTC 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,340,809
Number of Sequences: 53049
Number of extensions: 335846
Number of successful extensions: 667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)