Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28b05
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p pro...   146   3e-35
AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-P...   146   3e-35
AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprote...   146   3e-35
AY095531-1|AAM12262.1|  403|Drosophila melanogaster RE56531p pro...    89   6e-18
AF132158-1|AAD34746.1|  403|Drosophila melanogaster unknown prot...    89   6e-18
AE013599-1860|AAF58268.1|  403|Drosophila melanogaster CG8536-PA...    89   6e-18
BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p pro...    76   3e-14
BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p pro...    76   3e-14
AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-P...    76   3e-14
AE014297-3650|AAN14022.1|  197|Drosophila melanogaster CG10899-P...    32   0.70 
AE014297-3649|AAN14021.1|  279|Drosophila melanogaster CG10899-P...    32   0.70 
BT009986-1|AAQ22455.1| 1060|Drosophila melanogaster RE49819p pro...    31   1.2  
AE014296-411|AAF47610.2| 1085|Drosophila melanogaster CG15822-PC...    31   1.2  
BT014667-1|AAT27291.1|  196|Drosophila melanogaster AT24826p pro...    30   2.1  
AY113196-1|AAM29201.1|  279|Drosophila melanogaster AT02719p pro...    30   2.1  
AE014297-1589|AAZ52529.1|  140|Drosophila melanogaster CG33929-P...    28   8.7  

>AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p
           protein.
          Length = 322

 Score =  146 bits (353), Expect = 3e-35
 Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
 Frame = +1

Query: 313 RLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGFLQTR 492
           ++A++VPFRDRFEELL+FVPHMTAFLKRQ +  HIFV+ Q D  RFNRASLINVGF    
Sbjct: 76  KMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFAS 135

Query: 493 NNFEYMAMHDVDLLPLNDNLKYEYPEA-GPYHISSPDTH 606
           + ++Y+AMHDVDLLPLNDNL YEYP + GP HI+ P  H
Sbjct: 136 DVYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGPKLH 174


>AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-PA
           protein.
          Length = 322

 Score =  146 bits (353), Expect = 3e-35
 Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
 Frame = +1

Query: 313 RLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGFLQTR 492
           ++A++VPFRDRFEELL+FVPHMTAFLKRQ +  HIFV+ Q D  RFNRASLINVGF    
Sbjct: 76  KMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFAS 135

Query: 493 NNFEYMAMHDVDLLPLNDNLKYEYPEA-GPYHISSPDTH 606
           + ++Y+AMHDVDLLPLNDNL YEYP + GP HI+ P  H
Sbjct: 136 DVYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGPKLH 174


>AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprotein
           beta4-galactosyltransferaseprotein.
          Length = 322

 Score =  146 bits (353), Expect = 3e-35
 Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
 Frame = +1

Query: 313 RLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGFLQTR 492
           ++A++VPFRDRFEELL+FVPHMTAFLKRQ +  HIFV+ Q D  RFNRASLINVGF    
Sbjct: 76  KMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFAS 135

Query: 493 NNFEYMAMHDVDLLPLNDNLKYEYPEA-GPYHISSPDTH 606
           + ++Y+AMHDVDLLPLNDNL YEYP + GP HI+ P  H
Sbjct: 136 DVYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGPKLH 174


>AY095531-1|AAM12262.1|  403|Drosophila melanogaster RE56531p
           protein.
          Length = 403

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +1

Query: 241 IEEEKPALLKQSVAEIPTINTNKKRLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIF 420
           IE E   LL+   A  P     +  +AI+VPFRDR+  LL F+ ++  FL +Q I + IF
Sbjct: 158 IEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIF 217

Query: 421 VVQQKDSNRFNRASLINVGFLQTRNNFEY--MAMHDVDLLPLNDNLKYEYPEAGPYHIS 591
           +V+Q +   FNRA+++N+G+L+    +++     HDVDLLPL+D   Y  P   P H+S
Sbjct: 218 IVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQ-PRHMS 275


>AF132158-1|AAD34746.1|  403|Drosophila melanogaster unknown
           protein.
          Length = 403

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +1

Query: 241 IEEEKPALLKQSVAEIPTINTNKKRLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIF 420
           IE E   LL+   A  P     +  +AI+VPFRDR+  LL F+ ++  FL +Q I + IF
Sbjct: 158 IEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIF 217

Query: 421 VVQQKDSNRFNRASLINVGFLQTRNNFEY--MAMHDVDLLPLNDNLKYEYPEAGPYHIS 591
           +V+Q +   FNRA+++N+G+L+    +++     HDVDLLPL+D   Y  P   P H+S
Sbjct: 218 IVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQ-PRHMS 275


>AE013599-1860|AAF58268.1|  403|Drosophila melanogaster CG8536-PA
           protein.
          Length = 403

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +1

Query: 241 IEEEKPALLKQSVAEIPTINTNKKRLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIF 420
           IE E   LL+   A  P     +  +AI+VPFRDR+  LL F+ ++  FL +Q I + IF
Sbjct: 158 IEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIF 217

Query: 421 VVQQKDSNRFNRASLINVGFLQTRNNFEY--MAMHDVDLLPLNDNLKYEYPEAGPYHIS 591
           +V+Q +   FNRA+++N+G+L+    +++     HDVDLLPL+D   Y  P   P H+S
Sbjct: 218 IVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQ-PRHMS 275


>BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p
           protein.
          Length = 323

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 319 AIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGF-LQTRN 495
           AIIVP+R R E+L  F+ +M  +L +Q I + IF+V+Q D   FNRA L N+G  +    
Sbjct: 112 AIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHKPFNRAMLFNIGAQVAAEY 171

Query: 496 NFEYMAMHDVDLLPLNDNLKYEYPEAGPYHISSPDTH 606
            F  + +HDVDLLPLN    Y   E  P H+SS   H
Sbjct: 172 GFPCLILHDVDLLPLNSGQIYACSER-PRHMSSALDH 207


>BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p
           protein.
          Length = 295

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 319 AIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGF-LQTRN 495
           AIIVP+R R E+L  F+ +M  +L +Q I + IF+V+Q D   FNRA L N+G  +    
Sbjct: 84  AIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHKPFNRAMLFNIGAQVAAEY 143

Query: 496 NFEYMAMHDVDLLPLNDNLKYEYPEAGPYHISSPDTH 606
            F  + +HDVDLLPLN    Y   E  P H+SS   H
Sbjct: 144 GFPCLILHDVDLLPLNSGQIYACSER-PRHMSSALDH 179


>AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-PA
           protein.
          Length = 323

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +1

Query: 319 AIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGF-LQTRN 495
           AIIVP+R R E+L  F+ +M  +L +Q I + IF+V+Q D   FNRA L N+G  +    
Sbjct: 112 AIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHKPFNRAMLFNIGAQVAAEY 171

Query: 496 NFEYMAMHDVDLLPLNDNLKYEYPEAGPYHISSPDTH 606
            F  + +HDVDLLPLN    Y   E  P H+SS   H
Sbjct: 172 GFPCLILHDVDLLPLNSGQIYACSER-PRHMSSALDH 207


>AE014297-3650|AAN14022.1|  197|Drosophila melanogaster CG10899-PB,
           isoform B protein.
          Length = 197

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 324 HRSVPGPLRGAPRVRSSHDRLPEETRNSIPHLCGSTEGQQPFQQSFIDKCW 476
           H+S+  PL       +   R+P+    S P LC STEGQQ F+   +   W
Sbjct: 62  HKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISTEGQQVFEADQLHFHW 112


>AE014297-3649|AAN14021.1|  279|Drosophila melanogaster CG10899-PA,
           isoform A protein.
          Length = 279

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 324 HRSVPGPLRGAPRVRSSHDRLPEETRNSIPHLCGSTEGQQPFQQSFIDKCW 476
           H+S+  PL       +   R+P+    S P LC STEGQQ F+   +   W
Sbjct: 62  HKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISTEGQQVFEADQLHFHW 112


>BT009986-1|AAQ22455.1| 1060|Drosophila melanogaster RE49819p
           protein.
          Length = 1060

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 318 SNHRSVPGPLRGAPRVRSSHDRLPEETRNS 407
           S  RSV G +RG   +RS+HD+L  E R +
Sbjct: 332 SRQRSVAGDVRGCEALRSAHDQLELECRET 361


>AE014296-411|AAF47610.2| 1085|Drosophila melanogaster CG15822-PC
           protein.
          Length = 1085

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 318 SNHRSVPGPLRGAPRVRSSHDRLPEETRNS 407
           S  RSV G +RG   +RS+HD+L  E R +
Sbjct: 332 SRQRSVAGDVRGCEALRSAHDQLELECRET 361


>BT014667-1|AAT27291.1|  196|Drosophila melanogaster AT24826p
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 324 HRSVPGPLRGAPRVRSSHDRLPEETRNSIPHLCGSTEGQQPFQQSFIDKCW 476
           H+S+  PL       +   R+P+    S P LC S+EGQQ F+   +   W
Sbjct: 61  HKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISSEGQQVFEADQLHFHW 111


>AY113196-1|AAM29201.1|  279|Drosophila melanogaster AT02719p
           protein.
          Length = 279

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 324 HRSVPGPLRGAPRVRSSHDRLPEETRNSIPHLCGSTEGQQPFQQSFIDKCW 476
           H+S+  PL       +   R+P+    S P LC S+EGQQ F+   +   W
Sbjct: 62  HKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISSEGQQVFEADQLHFHW 112


>AE014297-1589|AAZ52529.1|  140|Drosophila melanogaster CG33929-PA
           protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +1

Query: 88  MTLRRIKTIT*HKIFMYISISLMGYRITNSRCLVLCVILTFVMGCYLASLPIEEEKPALL 267
           M   RIK ++   +F+ I  +  G+  TN +C+      +    C+L SL     K A L
Sbjct: 1   MCRARIKVLSCFLLFLIIPTAHSGFEFTNIKCISHNESFSSFEYCFLKSLN-RTYKYASL 59

Query: 268 KQSVAEIP 291
           K  + ++P
Sbjct: 60  KVKLHQVP 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,327,646
Number of Sequences: 53049
Number of extensions: 506377
Number of successful extensions: 1670
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)