Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28b03
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1213 - 28463774-28464286 32 0.15
04_04_0351 + 24615858-24616448 32 0.15
05_05_0154 - 22774503-22774652,22774738-22774968,22775508-227756... 31 0.25
03_06_0099 - 31645398-31645955 30 0.59
12_01_0771 - 7013343-7013861 29 1.4
03_05_0917 + 28774068-28774128,28774293-28774392,28774413-287750... 29 1.4
01_06_1236 + 35613123-35613816,35615809-35615952,35616032-356161... 29 1.4
07_03_1703 + 28835714-28836307 28 1.8
05_01_0450 + 3577928-3579526,3579695-3579832 28 1.8
02_04_0547 - 23786224-23786718 28 2.4
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 28 2.4
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 27 3.1
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 27 4.1
05_01_0157 + 1056024-1056116,1056417-1056631,1057027-1057297,105... 27 4.1
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469... 27 4.1
12_01_1074 - 11164802-11164813,11165122-11165172,11165358-111654... 27 5.5
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 27 5.5
12_02_0320 - 17504511-17505016,17505757-17506147 26 7.2
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 26 7.2
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 26 7.2
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 26 9.6
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041... 26 9.6
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 26 9.6
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 26 9.6
02_04_0245 + 21262645-21262754,21262851-21262997,21263100-212631... 26 9.6
>06_03_1213 - 28463774-28464286
Length = 170
Score = 31.9 bits (69), Expect = 0.15
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 13 FQLEDASNDGSIDSEEFSSVYASFGLDKAE 102
FQ D+ NDG + + E + AS GLDK E
Sbjct: 36 FQAFDSDNDGLVTAPELRGLLASLGLDKPE 65
>04_04_0351 + 24615858-24616448
Length = 196
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 10 IFQLEDASNDGSIDSEEFSSVYASFGL--DKAEAASAFQKL-SKGKSSVSFAEFQELFKE 180
+F+L D + DG I EE G+ E A+ ++ + G V EF EL++
Sbjct: 42 VFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRS 101
Query: 181 YFASEDVNAPG 213
A D + G
Sbjct: 102 IMAGGDDSKDG 112
>05_05_0154 -
22774503-22774652,22774738-22774968,22775508-22775675,
22775760-22775936,22776281-22776302,22776351-22776417,
22776583-22776774,22776819-22776962,22778421-22779102
Length = 610
Score = 31.1 bits (67), Expect = 0.25
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 4 KFIFQLEDASNDGSIDSEEFSSVYASFG--LDKAEAASAFQKL-SKGKSSVSFAEF 162
K +F++ D NDG + EE S A FG L ++E + + + G+ ++ + EF
Sbjct: 443 KDMFKVMDTDNDGIVSYEELKSGIAKFGSHLAESEVQMLIEAVDTNGRGALDYGEF 498
>03_06_0099 - 31645398-31645955
Length = 185
Score = 29.9 bits (64), Expect = 0.59
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 10 IFQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFA 189
IFQ D NDG I E S+ +AS G D+ A S + + FA F L + +
Sbjct: 60 IFQHFDRDNDGKISGAELSAFFASMG-DEMPAPSPGGGGAAAGYMLDFAGFVALMERGDS 118
Query: 190 SED 198
E+
Sbjct: 119 QEE 121
>12_01_0771 - 7013343-7013861
Length = 172
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 DASNDGSIDSEEFSSVYAS-FGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFASEDV 201
DA+ DG +D EEF +Y S G D A A + G + + E +E F D
Sbjct: 50 DANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQ 109
Query: 202 NAPG 213
N G
Sbjct: 110 NGDG 113
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 IFQLEDASNDGSIDSEEFSSVYASFG--LDKAEAASAFQKL-SKGKSSVSFAEFQELFKE 180
+F++ D + DG I +E + +FG + E + K+ + G V EF L++
Sbjct: 9 VFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRS 68
Query: 181 YFASE 195
+
Sbjct: 69 ILGDD 73
>03_05_0917 +
28774068-28774128,28774293-28774392,28774413-28775056,
28775567-28775727,28776362-28776430
Length = 344
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 13 FQLEDASNDGSIDSEEFSSVYASFGLDKAEA---ASAFQKLSKGKSSVSFAEF 162
F D ++DG I SEE + + GL+ EA A + G ++ F EF
Sbjct: 260 FDRFDRNDDGFITSEELGELLSCLGLNHTEAELQAMIEEAAPDGNGAIDFHEF 312
>01_06_1236 +
35613123-35613816,35615809-35615952,35616032-35616184,
35616572-35616687,35616800-35616967,35617647-35617707,
35617772-35617824,35618278-35618508,35618600-35618749
Length = 589
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 4 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEA 105
K +F+ D NDG + EE S A FG AE+
Sbjct: 384 KEMFKAMDTDNDGIVSYEELKSGIAKFGSHLAES 417
>07_03_1703 + 28835714-28836307
Length = 197
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 10 IFQLEDASNDGSIDSEEFSSVYASFGL--DKAE-AASAFQKLSKGKSSVSFAEFQELFK 177
+F L D + DG I +E + + GL D+A AA+ + G + + F +F+ L +
Sbjct: 43 VFDLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLHR 101
>05_01_0450 + 3577928-3579526,3579695-3579832
Length = 578
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 13 FQLEDASNDGSIDSEEFSSVYASFGLDKAEAASAFQKL---SKGK-SSVSFAEFQELFK 177
FQL D + DG I EE + + G +A + L S G SS FA FQ+ K
Sbjct: 477 FQLLDKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSDGSLSSDEFALFQKRVK 535
>02_04_0547 - 23786224-23786718
Length = 164
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 10 IFQLEDASNDGSIDSEEFSSVYASFGL--DKAEAASAFQKL-SKGKSSVSFAEFQELFK 177
+F+L D DG I EE + G+ + E A+ ++ + G V EF +L++
Sbjct: 12 VFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYE 70
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 139 TCLWIASEKLMQLQPCLDQKMRRP 68
T LWI S LM LQ C + +RP
Sbjct: 106 TFLWIMSVSLMVLQVCTQRSWKRP 129
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 224 KTKFPGAFTSSEAKYSLNNSWNSAKETDDL 135
+ K P +SS+ K L + N AK+TDDL
Sbjct: 332 RVKSPSGPSSSDKKAELPSDDNQAKDTDDL 361
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 31 SNDGSIDSEEFSSVYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFASEDVNAP 210
S +G DS + A + Q SKGK+ +S +F FK + ++ +AP
Sbjct: 225 SPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKAHISAWKFMSYFKSGYTNQRSSAP 284
Query: 211 GNFVFGKTS 237
G S
Sbjct: 285 SEHGSGLLS 293
>05_01_0157 +
1056024-1056116,1056417-1056631,1057027-1057297,
1058040-1058365,1058677-1058769,1060182-1060244,
1062788-1062928,1063438-1063620,1064215-1064413,
1064498-1064702,1065817-1065944
Length = 638
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 100 QPCLDQKMRRPKRIPR 53
+P LDQ++RRP R PR
Sbjct: 230 RPMLDQEIRRPHRFPR 245
>02_05_0597 +
30245455-30245767,30246693-30246760,30246851-30246939,
30247047-30247212,30247296-30247585,30247692-30247896,
30248013-30248170,30248352-30248595
Length = 510
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 4 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKAEAAS 111
K I +L D N GS+ +EFSS+ S ++ AAS
Sbjct: 443 KLIVELVDQYNSGSMLWDEFSSLIKSVHANRMGAAS 478
>12_01_1074 -
11164802-11164813,11165122-11165172,11165358-11165459,
11165877-11165937,11166276-11168320
Length = 756
Score = 26.6 bits (56), Expect = 5.5
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -2
Query: 130 WIASEKLMQLQPC 92
W+A+EKL +L+PC
Sbjct: 639 WLAAEKLFELEPC 651
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 13 FQLEDASNDGSIDSEEFSSVYASFGLDKA--EAASAFQKL-SKGKSSVSFAEFQEL 171
F L D + DG I EE ++V S GL+ E +++ + G + F EF L
Sbjct: 255 FLLFDKNGDGCITLEELAAVTRSLGLEPTDQELNDMMREVDTDGNGIIDFQEFLSL 310
>12_02_0320 - 17504511-17505016,17505757-17506147
Length = 298
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 25 DASNDGSIDSEEFSS-VYASFGLDKAEAASAFQKLSKGKSSVSFAEFQELFKEYFA 189
D N S +EE +S ++ + + + +A KLS G ++S F +L+K+ FA
Sbjct: 111 DFFNTWSRKAEELASNIWFNLKTAPSMSDAAMGKLSLGAKALSEGGFDKLYKQTFA 166
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 85 GLDKAEAASAFQKLSKGKSSVSFAEFQELFKEY 183
GLD + ASAF + + VS + F+E EY
Sbjct: 279 GLDIEQMASAFASAGRTNTLVSLSGFREFEPEY 311
>01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 188 AKYSLNNSWNSAKETDDLPLDSF*KADAASALSRPKDA*TEENSSLSMD 42
A+ S+ SW K PLD F + D P D T N + MD
Sbjct: 1007 ARNSIAQSWTRGKGKMVHPLDRFVRQDICITNKNPADFTTISNDNEYMD 1055
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 25 DASNDGSIDSEEFSSVYAS 81
D++NDG +D EEF V S
Sbjct: 133 DSNNDGQVDYEEFKRVMMS 151
>06_02_0023 +
10702040-10702364,10702530-10702747,10703643-10704190,
10704272-10704523,10704611-10704721,10704812-10704893,
10704969-10705061,10705146-10705340
Length = 607
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 198 CERPWKLCLREDQLLKYSELIVILIMICV 284
CE PW + L D L+ SEL + +I + V
Sbjct: 297 CELPWPMRLMHDWYLRASELDLGMITVHV 325
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 4 KFIFQLEDASNDGSIDSEEFSSVYASFGLDKA--EAASAFQKLSKGK 138
K + L DA++DGS+ S+EF + L ++ + ++K+ K K
Sbjct: 513 KELMHLLDANSDGSLSSDEFEAFQRQIELMRSLDDKDDRYRKILKEK 559
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 8 LYFNLRMLVMTGPSTARN--SLRSTHLLV*TRLKLHQLFRSYPKASHLSPSLNS 163
LYF ++ V RN S+ L+ ++H+L R Y + L P+L S
Sbjct: 145 LYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTKKLPPTLRS 198
>02_04_0245 +
21262645-21262754,21262851-21262997,21263100-21263156,
21263256-21263442,21264700-21264925,21265474-21266003
Length = 418
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 59 NSLRSTHLLV*TRLKLHQLFRSYPKASHLSPSLNSRNCSKNISLLRM*TPLETLSSGRPA 238
+ LR T L+ T +++ + + + + SPS + C K I LR +E L+ PA
Sbjct: 75 DGLRKTANLI-TSVRMVRQIQGKNQTTVSSPSYSYARCRKEIRCLRRKDVMEALAKSVPA 133
Query: 239 SEV 247
+
Sbjct: 134 HTI 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,402,143
Number of Sequences: 37544
Number of extensions: 123935
Number of successful extensions: 414
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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