Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt28a24
         (178 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p pro...    88   2e-18
AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA...    88   2e-18
BT011486-1|AAR99144.1|   82|Drosophila melanogaster RE01061p pro...    30   0.37 
AY058552-1|AAL13781.1|  508|Drosophila melanogaster LD24726p pro...    30   0.37 
AE014296-3711|AAF51855.3|  508|Drosophila melanogaster CG11241-P...    30   0.37 
AY047517-1|AAK77249.1|  431|Drosophila melanogaster GH01984p pro...    28   2.0  
AE014296-3193|AAF49127.1|  431|Drosophila melanogaster CG8782-PA...    28   2.0  

>AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p
           protein.
          Length = 494

 Score = 87.8 bits (208), Expect = 2e-18
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 14  QSMPKSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVA 178
           + + K+ETI+LR +H+G ACQLF+RS PLKIVRG  Q+M+DE G RYLDCINNVA
Sbjct: 14  EQLSKTETIKLRNQHIGQACQLFYRSDPLKIVRGQGQYMFDEEGTRYLDCINNVA 68


>AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA
           protein.
          Length = 494

 Score = 87.8 bits (208), Expect = 2e-18
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 14  QSMPKSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNVA 178
           + + K+ETI+LR +H+G ACQLF+RS PLKIVRG  Q+M+DE G RYLDCINNVA
Sbjct: 14  EQLSKTETIKLRNQHIGQACQLFYRSDPLKIVRGQGQYMFDEEGTRYLDCINNVA 68


>BT011486-1|AAR99144.1|   82|Drosophila melanogaster RE01061p
           protein.
          Length = 82

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 32  ETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNV 175
           + ++ R  H+       F+  PL I  G  Q++YD  G RYLD    +
Sbjct: 26  QILKTRRNHLTPNLLAHFKK-PLVIHAGHMQWLYDHEGRRYLDMFGGI 72


>AY058552-1|AAL13781.1|  508|Drosophila melanogaster LD24726p
           protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 32  ETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNV 175
           + ++ R  H+       F+  PL I  G  Q++YD  G RYLD    +
Sbjct: 60  QILKTRRNHLTPNLLTHFKK-PLVIHAGHMQWLYDHEGRRYLDMFGGI 106


>AE014296-3711|AAF51855.3|  508|Drosophila melanogaster CG11241-PA
           protein.
          Length = 508

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 32  ETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCINNV 175
           + ++ R  H+       F+  PL I  G  Q++YD  G RYLD    +
Sbjct: 60  QILKTRRNHLTPNLLAHFKK-PLVIHAGHMQWLYDHEGRRYLDMFGGI 106


>AY047517-1|AAK77249.1|  431|Drosophila melanogaster GH01984p
           protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 26  KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCIN 169
           +SE +  RE   GA     +   P+ + +G   F++D  G+RY D ++
Sbjct: 33  RSELVYARENKYGAHN---YHPLPVALTKGEGVFVWDVEGKRYFDYLS 77


>AE014296-3193|AAF49127.1|  431|Drosophila melanogaster CG8782-PA
           protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 26  KSETIQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCIN 169
           +SE +  RE   GA     +   P+ + +G   F++D  G+RY D ++
Sbjct: 33  RSELVYARENKYGAHN---YHPLPVALTKGEGVFVWDVEGKRYFDYLS 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,950,421
Number of Sequences: 53049
Number of extensions: 123603
Number of successful extensions: 377
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 24,988,368
effective HSP length: 39
effective length of database: 22,919,457
effective search space used: 435469683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)