Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28a24
(178 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 0.45
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 0.78
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 1.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 1.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 19 4.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 4.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 19 4.2
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 19 5.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 5.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 19 5.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 5.5
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 19 7.3
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 18 9.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 18 9.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 18 9.6
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.6 bits (46), Expect = 0.45
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 71 TPLQHVSREVEWFQIWALIV 12
TPL + R V+WF+ L+V
Sbjct: 48 TPLDRLQRVVDWFRKNMLLV 67
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 0.78
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 98 RGKNGKTVGTPLQHVSREVEW 36
RGKN +G L VEW
Sbjct: 186 RGKNVVDIGVDLSEFYTSVEW 206
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 52 ETCWSGVPTVFP 87
E CWSG P+ P
Sbjct: 836 EQCWSGEPSKRP 847
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 52 ETCWSGVPTVFP 87
E CWSG P+ P
Sbjct: 874 EQCWSGEPSKRP 885
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 19.4 bits (38), Expect = 4.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 59 HVSREVEWFQI 27
H S + EWFQ+
Sbjct: 124 HTSDQHEWFQL 134
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 24 PNLKPFNFARNMLE 65
PNL+ N ARN ++
Sbjct: 502 PNLQILNLARNKVQ 515
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 19.4 bits (38), Expect = 4.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 59 HVSREVEWFQI 27
H S + EWFQ+
Sbjct: 124 HTSDQHEWFQL 134
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 74 GTPLQHVSREVEWFQIWAL 18
G + VS ++ WF+ W +
Sbjct: 125 GDNMLEVSSKMPWFKGWTV 143
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.0 bits (37), Expect = 5.5
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +2
Query: 38 IQLREKHVGAACQLFFRSSPLKIVRGIAQFMYDETGERYLDCIN 169
I LR K + L + + +A ++ ++GE+ CIN
Sbjct: 229 ITLRRKTLFYTVNLIVPCVSISYLSVLAFYLPADSGEKIALCIN 272
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 74 GTPLQHVSREVEWFQIWAL 18
G + VS ++ WF+ W +
Sbjct: 141 GDNMLEVSSKMPWFKGWTV 159
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 74 GTPLQHVSREVEWFQIWAL 18
G + VS ++ WF+ W +
Sbjct: 198 GDNMLEVSSKMPWFKGWTV 216
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/24 (29%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 156 RYLSPVSSYMNCAIPRT-IFKGEE 88
+YL+ S ++ CA+ ++ I + +E
Sbjct: 70 KYLTNYSCFITCALEKSHIIQNDE 93
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 114 PRTIFKGEE 88
PRT F GE+
Sbjct: 23 PRTAFSGEQ 31
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -3
Query: 95 GKNGKTVGTPLQHVSREVEW 36
G N VG L VEW
Sbjct: 191 GSNVVDVGVDLSEFYMSVEW 210
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -3
Query: 95 GKNGKTVGTPLQHVSREVEW 36
G N VG L VEW
Sbjct: 191 GSNVVDVGVDLSEFYMSVEW 210
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 18.2 bits (35), Expect = 9.6
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = -3
Query: 44 VEWFQIW 24
+ WF+IW
Sbjct: 29 LRWFEIW 35
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2
Query: 50 EKHVGAACQLFFRSSPL 100
E VG C++ + +PL
Sbjct: 171 EDSVGGKCEVLYDIAPL 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,248
Number of Sequences: 438
Number of extensions: 702
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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