Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28a18
(495 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 44 7e-05
01_07_0339 + 42848065-42848943,42849308-42849526 38 0.004
09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914 35 0.031
09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386 35 0.041
05_01_0064 + 454786-455646,456537-456752 34 0.072
09_06_0306 + 22186853-22187267,22187553-22187818,22187913-221880... 33 0.095
09_06_0305 - 22164397-22164779,22164870-22165308 33 0.095
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656... 33 0.13
09_06_0301 - 22135076-22135333,22136298-22136304,22136751-221369... 33 0.13
09_03_0156 - 12844549-12845138,12845237-12845723 33 0.13
01_03_0212 + 13842142-13842634,13842727-13843319 33 0.13
01_03_0209 - 13820980-13821572,13821665-13822157 33 0.13
09_06_0288 - 22051412-22051515,22051572-22052103 33 0.17
09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064 32 0.29
01_07_0148 - 41477708-41477914,41478004-41478179,41478334-41478373 31 0.38
01_07_0144 - 41446735-41446941,41447031-41447206,41447361-41447400 31 0.38
01_03_0124 + 12734846-12735356,12735449-12736041 31 0.51
01_01_0821 + 6399890-6400397,6400474-6401066 31 0.51
09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183 30 0.89
07_01_0064 + 463358-464341 30 0.89
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511... 30 1.2
02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875... 30 1.2
01_06_1730 + 39494738-39495853 30 1.2
09_06_0307 - 22190310-22190468,22190516-22190569,22190677-221910... 29 2.1
08_02_1557 + 27867977-27869134 29 2.1
04_04_1538 + 34239913-34241274,34241468-34241578 29 2.7
03_04_0168 + 17953848-17954585 29 2.7
01_03_0211 - 13830871-13831463,13831549-13831915 29 2.7
01_03_0210 + 13825272-13825707,13825794-13826386 29 2.7
09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 28 3.6
04_04_1536 - 34207425-34207490,34207801-34208268,34208345-342084... 28 3.6
07_01_1136 + 10668637-10669665,10670259-10670282 28 4.7
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 27 6.3
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 27 6.3
11_08_0076 + 28178354-28178610,28179504-28179600,28179720-281797... 27 8.3
06_01_0055 + 476204-476388,476481-476543,476684-476800,476920-47... 27 8.3
01_05_0405 - 21866058-21866255,21866711-21867172,21867389-21867577 27 8.3
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 220 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 399
++ +K +H +Y + E+ R + ++ I +HN + G+ S++LG+N++ D+ + E
Sbjct: 40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEE 99
Query: 400 FVKTMNGF-NKTAKHNK 447
+ T G NK + K
Sbjct: 100 YRDTYLGLRNKPRRERK 116
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
E + F ++R Y S E R +++ ++ + I + N+K + Y LG+N++ D+ H
Sbjct: 50 ELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKK----ITGYWLGLNEFADLTH 105
Query: 394 HEFVKTMNGFNKT-AKHNKN 450
EF G T A+ N N
Sbjct: 106 DEFKAAYLGLTLTPARRNSN 125
>09_06_0299 - 22119427-22119477,22119823-22120193,22120503-22120914
Length = 277
Score = 35.1 bits (77), Expect = 0.031
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +1
Query: 202 DLVKEE--WSAFK----LQHRLNYESEV-EDNFRMKIYAEHKHIIAKHNQKYEMGLVSYK 360
DL EE WS ++ H + + +V E R + + + +++ N+K M +YK
Sbjct: 16 DLESEESMWSLYQRWRGAVHTSSLDMDVAETESRFEAFKANARYVSEFNKKEGM---TYK 72
Query: 361 LGMNKYGDMLHHEFVKTMNG 420
LG+NK+ DM EFV G
Sbjct: 73 LGLNKFADMTLEEFVAKYTG 92
>09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386
Length = 349
Score = 34.7 bits (76), Expect = 0.041
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +1
Query: 202 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 381
DL+ + + + ++H Y E R ++Y + ++ N YKL NK+
Sbjct: 25 DLMLDRFEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFNSMSN----GYKLADNKFA 80
Query: 382 DMLHHEFVKTMNGF 423
D+ + EF M GF
Sbjct: 81 DLTNEEFRAKMLGF 94
>05_01_0064 + 454786-455646,456537-456752
Length = 358
Score = 33.9 bits (74), Expect = 0.072
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
E+W A ++R Y S E R +++ ++ + I N+K + SY LG+N++ D+ H
Sbjct: 52 EKWVA---KYRKAYASFEEKVRRFEVFKDNLNHIDDINKK----VTSYWLGLNEFADLTH 104
Query: 394 HEFVKTMNG 420
EF T G
Sbjct: 105 DEFKATYLG 113
>09_06_0306 +
22186853-22187267,22187553-22187818,22187913-22188053,
22188521-22188772
Length = 357
Score = 33.5 bits (73), Expect = 0.095
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 280 RMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNGFN 426
R +++ ++ I N+K M SYKLG+NK+ D+ EF G N
Sbjct: 49 RFEVFKKNARYIHDFNRKKGM---SYKLGLNKFADLTLEEFTAKYTGAN 94
>09_06_0305 - 22164397-22164779,22164870-22165308
Length = 273
Score = 33.5 bits (73), Expect = 0.095
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +1
Query: 202 DLVKEE--WSAF-KLQHRLNYESE--VEDN-FRMKIYAEHKHIIAKHNQKYEMGLVSYKL 363
DL EE WS + + H S ED R +++ + I + N+K M SYKL
Sbjct: 26 DLKSEESMWSLYERWSHVYGVSSRDLAEDKKSRFEVFKANARHIHEFNKKEGM---SYKL 82
Query: 364 GMNKYGDMLHHEFVKTMNG 420
G+NK+ DM EF G
Sbjct: 83 GLNKFSDMTVEEFAAKYTG 101
>11_04_0051 +
12863978-12864476,12864575-12864674,12865567-12865657,
12866114-12866176,12866364-12866549,12866994-12867024,
12867054-12867502
Length = 472
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 205 LVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGD 384
++ + + A++ H +Y S E R +Y + I N + G ++Y+L N++ D
Sbjct: 46 VMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLR---GDLTYQLAENEFAD 102
Query: 385 MLHHEFVKTMNGF 423
+ EF+ T G+
Sbjct: 103 LTEEEFLATYTGY 115
>09_06_0301 -
22135076-22135333,22136298-22136304,22136751-22136947,
22137089-22137471,22137624-22138029
Length = 416
Score = 33.1 bits (72), Expect = 0.13
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 202 DLVKEE--WSAFKLQHRLNYES-EVED-NFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGM 369
DL EE WS ++ + S ++ D R +++ + I + NQK + G+ SY LG+
Sbjct: 15 DLETEESMWSLYERWRAVYAPSRDLSDMESRFEVFKANARYIHEFNQKSK-GM-SYVLGL 72
Query: 370 NKYGDMLHHEFVKTMNG 420
NK+ D+ + EF G
Sbjct: 73 NKFSDLTYEEFAAKYTG 89
>09_03_0156 - 12844549-12845138,12845237-12845723
Length = 358
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 205 LVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGD 384
++ + + A++ H +Y S E R +Y + I N + G ++Y+L N++ D
Sbjct: 42 VMMDRFRAWQGAHNRSYPSAEEALQRFDVYRRNAEFIDAVNLR---GDLTYQLAENEFAD 98
Query: 385 MLHHEFVKTMNGF 423
+ EF+ T G+
Sbjct: 99 LTEEEFLATYTGY 111
>01_03_0212 + 13842142-13842634,13842727-13843319
Length = 361
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 361 LGMNKYGDMLHHEFVKTMNGFNKTAKHN 444
+GMN++GD+ EFV+ GFN + H+
Sbjct: 104 VGMNRFGDLTSTEFVQQFTGFNASGFHS 131
>01_03_0209 - 13820980-13821572,13821665-13822157
Length = 361
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 361 LGMNKYGDMLHHEFVKTMNGFNKTAKHN 444
+GMN++GD+ EFV+ GFN + H+
Sbjct: 104 VGMNRFGDLTSTEFVQQFTGFNASGFHS 131
>09_06_0288 - 22051412-22051515,22051572-22052103
Length = 211
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
E + +K ++ +Y + E+ R+++YA + I N GL +Y+LG Y D+ +
Sbjct: 48 ERFRRWKAEYNRSYATAGEERRRLRVYARNVRYIEATNAA--AGL-AYELGETAYTDLTN 104
Query: 394 HEFV 405
EF+
Sbjct: 105 DEFI 108
>09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064
Length = 369
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
+ W A + ++E F + + + +++ N+K M +Y+LG+NK+ DM
Sbjct: 49 DRWRAVYASSSSHLGGDIESRF--EAFKANARYVSEFNKKEGM---TYELGLNKFADMTL 103
Query: 394 HEFVKTMNG 420
EFV G
Sbjct: 104 EEFVAKYAG 112
>01_07_0148 - 41477708-41477914,41478004-41478179,41478334-41478373
Length = 140
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 315 RQTQPEVRNGPRFLQAGHEQVRRHAP-PRVREDYERLQQNCQTQQESV 455
R+ QP +R R L + E + +H R+RED+ RLQ C Q V
Sbjct: 35 RRAQPGIRPPRRPLPSKREVLAQHHELRRLREDFARLQVQCSALQAQV 82
>01_07_0144 - 41446735-41446941,41447031-41447206,41447361-41447400
Length = 140
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 315 RQTQPEVRNGPRFLQAGHEQVRRHAP-PRVREDYERLQQNCQTQQESV 455
R+ QP +R R L + E + +H R+RED+ RLQ C Q V
Sbjct: 35 RRAQPGIRPPRRPLPSKREVLAQHHELRRLREDFARLQVQCSALQAQV 82
>01_03_0124 + 12734846-12735356,12735449-12736041
Length = 367
Score = 31.1 bits (67), Expect = 0.51
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 361 LGMNKYGDMLHHEFVKTMNGFNKT 432
+GMN +GD+ EFV+ GFN T
Sbjct: 108 VGMNLFGDLASGEFVRQFTGFNAT 131
>01_01_0821 + 6399890-6400397,6400474-6401066
Length = 366
Score = 31.1 bits (67), Expect = 0.51
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Frame = +1
Query: 220 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEM--GLVSYK--------LGM 369
+S + Q+ Y +E R +I+ ++ + I + E+ G+ ++ +GM
Sbjct: 49 FSRWMAQYGKAYSWPIEHEKRYQIWKDNSNFIGSFRSETEISSGVGAFAPQTVTDSFVGM 108
Query: 370 NKYGDMLHHEFVKTMNGFNKT 432
N++GD+ EF + GFN T
Sbjct: 109 NRFGDLTPGEFAEQFTGFNAT 129
>09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183
Length = 359
Score = 30.3 bits (65), Expect = 0.89
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 202 DLVKEE--WSAFKLQ---HRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLG 366
DL EE WS ++ H L E R + + + + + N+K M +YKL
Sbjct: 19 DLESEESMWSLYQRWSRVHGLTSRDLAEKQGRFEAFKANARHVNEFNKKEGM---TYKLA 75
Query: 367 MNKYGDMLHHEFVKTMNG 420
+N++ DM EFV G
Sbjct: 76 LNRFADMTLQEFVAKYAG 93
>07_01_0064 + 463358-464341
Length = 327
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
++W A +H Y+ E R +++ + +I + N G Y+L N++ D+
Sbjct: 18 DKWMA---EHGRTYKDAAEKARRFRVFKANVDLIDRSNAA---GNKRYRLATNRFTDLTD 71
Query: 394 HEFVKTMNGFN 426
EF G+N
Sbjct: 72 AEFAAMYTGYN 82
>09_06_0303 -
22149214-22149474,22150099-22150236,22150856-22151100,
22151344-22151809
Length = 369
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Frame = +1
Query: 202 DLVKEE--WSAFKLQHRLNYESEVED-------NFRMKIYAEHKHIIAKHNQKYEMGLVS 354
DL EE W ++ R+ Y S +D R + + + + + N+K M S
Sbjct: 32 DLESEETMWDLYERWRRV-YASSSQDLPSSDMMKSRFEAFKANARQVNEFNKKEGM---S 87
Query: 355 YKLGMNKYGDMLHHEFVKTMNG 420
Y LG+NK+ DM + EF G
Sbjct: 88 YTLGLNKFSDMSYEEFAAKYTG 109
>02_05_0514 +
29686263-29686728,29687078-29687313,29687435-29687575,
29687685-29687915
Length = 357
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 220 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 399
++++ ++H Y S E R +I+ + I + N++ SY LG+N + D+ H E
Sbjct: 46 FTSWSVKHSKIYASPKEKVKRYEIFKRNLRHIVETNRRNG----SYWLGLNHFADIAHEE 101
Query: 400 F 402
F
Sbjct: 102 F 102
>01_06_1730 + 39494738-39495853
Length = 371
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 268 EDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNG 420
E + R + ++ I +HN++ G Y+L +N++GDM EF T G
Sbjct: 61 EKHRRFGAFKDNVRYIHEHNKRGGRG---YRLRLNRFGDMGREEFRATFAG 108
>09_06_0307 -
22190310-22190468,22190516-22190569,22190677-22191053,
22191234-22191436,22192798-22192925
Length = 306
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 256 ESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNG 420
ESE +++ ++ I + N++ M SY LG+NK+ DM EF+ G
Sbjct: 35 ESEESMWSLFEVFKKNARYIHEFNKRKGM---SYWLGLNKFADMTSEEFMAKYTG 86
>08_02_1557 + 27867977-27869134
Length = 385
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
E + ++ QHR+ + E R ++ ++ +I + N++ E YKL +N++GDM
Sbjct: 46 ELYERWRGQHRVARDLG-EKARRFNVFKDNVRLIHEFNRRDE----PYKLRLNRFGDMTA 100
Query: 394 HEF 402
EF
Sbjct: 101 DEF 103
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 EDNFRMKIYAEHKHIIAKHNQKY-EMGLVSYKLGMNKYGDMLHHEFVKTMNG 420
E R +++ ++ + HN + E G ++LGMN++ D+ + EF T G
Sbjct: 84 EHERRFRVFWDNLKFVDAHNARADERG--GFRLGMNRFADLTNGEFRATYLG 133
>03_04_0168 + 17953848-17954585
Length = 245
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 467 PPFMYRFLLCLAVLLKPF-IVFTNSWWSMSPYL 372
P M L+CLAV + F I T+ WW ++P L
Sbjct: 161 PAVMVLMLVCLAVFGRVFAICCTSIWWYLAPTL 193
>01_03_0211 - 13830871-13831463,13831549-13831915
Length = 319
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
EEW A + Y+ E R I+ ++ H I + + +G+N++ D+ +
Sbjct: 21 EEWMA---KFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSA---VGINQFADLTN 74
Query: 394 HEFVKTMNG 420
EFV T G
Sbjct: 75 DEFVATYTG 83
>01_03_0210 + 13825272-13825707,13825794-13826386
Length = 342
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
EEW A + Y+ E R I+ ++ H I + + +G+N++ D+ +
Sbjct: 44 EEWMA---KFGKTYKCHGEKEHRFGIFRDNVHFIRGYKPQVTYDSA---VGINQFADLTN 97
Query: 394 HEFVKTMNG 420
EFV T G
Sbjct: 98 DEFVATYTG 106
>09_06_0302 -
22144271-22144543,22144946-22145083,22146004-22146278,
22146486-22146957
Length = 385
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 259 SEVEDNFR-MKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMNG 420
++VE F K A H + + N+K M +Y+LG+N++ DM EF G
Sbjct: 62 ADVESRFEAFKANARH---VNEFNKKEGM---TYRLGLNQFSDMTFEEFAGKFTG 110
>04_04_1536 -
34207425-34207490,34207801-34208268,34208345-34208485,
34208582-34208820,34209950-34210436
Length = 466
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 EDNFRMKIYAEHKHIIAKHNQKY-EMGLVSYKLGMNKYGDMLHHEFVKTMNG 420
E R ++ ++ + HN + E G ++LGMN++ D+ + EF T G
Sbjct: 70 EHERRFLVFWDNLKFVDAHNARADERG--GFRLGMNRFADLTNEEFRATFLG 119
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 204 PGQGRVECLQAAAPSQLRKRGRRQFPHEDI 293
P R+ C A P+ +R RR+FPH D+
Sbjct: 312 PALERITCGGAPLPAPAIERFRRRFPHVDL 341
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 321 TQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQ 437
+QP+ + GP F + + R+H P + + +RL NC+
Sbjct: 1016 SQPQHKAGP-FSRRVSKTKRKHPPTHLNKHVKRLHSNCK 1053
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 261 RGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQT 440
+ R Q P + ++ +AH +Q+ +++ LQ H Q ++ + + +R QQ Q
Sbjct: 99 KAREQQPSQ-LQQQEAHSQQSSQQIQMQQLLLQR-HAQQQQQQQSQQQPQQQRRQQKQQQ 156
Query: 441 QQESVH 458
+ ES H
Sbjct: 157 RSESSH 162
>11_08_0076 +
28178354-28178610,28179504-28179600,28179720-28179779,
28180071-28180151
Length = 164
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 222 ECLQAAAPSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRH--APP 395
E AAAP + ++GR++ ED + A A + + V +G R + Q R+
Sbjct: 40 EAAAAAAPPE--QKGRKRAKKEDAQVAAAAEKDSGAVVSDGKRIVVEACTQCRQFKIRAA 97
Query: 396 RVREDYE 416
+V+ED E
Sbjct: 98 KVKEDLE 104
>06_01_0055 +
476204-476388,476481-476543,476684-476800,476920-477328,
477448-477638,477706-477871
Length = 376
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 333 VRNGPRFLQAGHEQVRRHAPPRVRE-DYERLQQNCQTQQE 449
V G L G Q H PP+V E D E+ QQ Q QQ+
Sbjct: 329 VIGGLYLLLWGKRQEALHLPPKVAEHDKEQQQQQQQQQQQ 368
>01_05_0405 - 21866058-21866255,21866711-21867172,21867389-21867577
Length = 282
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 373 KYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVPGAXFIS 495
++ D L+ ++ T+N F+KT H K+ + +VP ++
Sbjct: 187 QFRDDLYEDYGNTLNHFSKTKAHPKHEPFEESNVPKVELVT 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,251,991
Number of Sequences: 37544
Number of extensions: 236089
Number of successful extensions: 754
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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