Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28a17
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 31 3.5
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 31 3.5
L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein. 30 6.1
EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precurs... 30 6.1
BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein pr... 30 6.1
BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4) precu... 30 6.1
AK124446-1|BAC85853.1| 539|Homo sapiens protein ( Homo sapiens ... 30 6.1
AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2 ... 30 6.1
AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein. 30 6.1
BC113560-1|AAI13561.1| 548|Homo sapiens IBRDC3 protein protein. 30 8.1
BC020595-1|AAH20595.2| 343|Homo sapiens IBRDC3 protein protein. 30 8.1
AL031602-2|CAI19337.1| 541|Homo sapiens IBR domain containing 3... 30 8.1
AK074486-1|BAC11017.1| 541|Homo sapiens protein ( Homo sapiens ... 30 8.1
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 423 DQLYQIRISVPMVDFGAVRVSEAVRGRLSRLP*TVLRPISTE----WFV*RVPRPAPHTV 590
D+ +I +++P +D+G V + + ++ + +PI + W +VP PAP+ V
Sbjct: 462 DESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEV 521
Query: 591 IMSRRQN 611
+ R+++
Sbjct: 522 LNDRKED 528
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 31.1 bits (67), Expect = 3.5
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 423 DQLYQIRISVPMVDFGAVRVSEAVRGRLSRLP*TVLRPISTE----WFV*RVPRPAPHTV 590
D+ +I +++P +D+G V + + ++ + +PI + W +VP PAP+ V
Sbjct: 462 DESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEV 521
Query: 591 IMSRRQN 611
+ R+++
Sbjct: 522 LNDRKED 528
>L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein.
Length = 710
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586
Query: 484 P 486
P
Sbjct: 587 P 587
>EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precursor
protein-binding family B member 1 transcript variant
protein.
Length = 492
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 263 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 316
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 317 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 368
Query: 484 P 486
P
Sbjct: 369 P 369
>BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein
protein.
Length = 502
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 273 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 326
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 327 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 378
Query: 484 P 486
P
Sbjct: 379 P 379
>BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1 (Fe65)
protein.
Length = 708
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 479 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 532
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 533 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 584
Query: 484 P 486
P
Sbjct: 585 P 585
>AK124446-1|BAC85853.1| 539|Homo sapiens protein ( Homo sapiens
cDNA FLJ42455 fis, clone BRACE2015314. ).
Length = 539
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 510 GTGARVLPRIHALLRSRPLGRRC--EFDKADQSTV 412
G +R LPR AL RSR L RC ++++A Q T+
Sbjct: 162 GQSSRALPRSRALPRSRELPARCRRDWERAPQRTL 196
>AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2
protein.
Length = 712
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586
Query: 484 P 486
P
Sbjct: 587 P 587
>AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein.
Length = 710
Score = 30.3 bits (65), Expect = 6.1
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +1
Query: 130 IYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDN 309
++ C K I + E C+K ++E RC+ +G + +D K+ D Q
Sbjct: 481 VFRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPA 534
Query: 310 PDWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVY 483
P + VQ F+ L + KP GVD +I+ AL S + +S QW+ S V
Sbjct: 535 PK-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVA 586
Query: 484 P 486
P
Sbjct: 587 P 587
>BC113560-1|AAI13561.1| 548|Homo sapiens IBRDC3 protein protein.
Length = 548
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 463 TSEQCVYPRQYAGACPVCPERCFAPSVPNGSCN 561
TS++C PR + ACP P APS P+ N
Sbjct: 497 TSDECGSPRSHTAACPSTPRAQGAPS-PSAHMN 528
>BC020595-1|AAH20595.2| 343|Homo sapiens IBRDC3 protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 463 TSEQCVYPRQYAGACPVCPERCFAPSVPNGSCN 561
TS++C PR + ACP P APS P+ N
Sbjct: 292 TSDECGSPRSHTAACPSTPRAQGAPS-PSAHMN 323
>AL031602-2|CAI19337.1| 541|Homo sapiens IBR domain containing 3
protein.
Length = 541
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 463 TSEQCVYPRQYAGACPVCPERCFAPSVPNGSCN 561
TS++C PR + ACP P APS P+ N
Sbjct: 490 TSDECGSPRSHTAACPSTPRAQGAPS-PSAHMN 521
>AK074486-1|BAC11017.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ90005 fis, clone HEMBA1000084, moderately
similar to GAMETOGENESIS EXPRESSED PROTEIN GEG-154. ).
Length = 541
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 463 TSEQCVYPRQYAGACPVCPERCFAPSVPNGSCN 561
TS++C PR + ACP P APS P+ N
Sbjct: 490 TSDECGSPRSHTAACPSTPRAQGAPS-PSAHMN 521
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,048,584
Number of Sequences: 237096
Number of extensions: 2124560
Number of successful extensions: 5458
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5451
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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