Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28a12
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035007-1|AAH35007.1| 594|Homo sapiens family with sequence si... 29 2.2
AK074076-1|BAB84902.1| 772|Homo sapiens FLJ00147 protein protein. 29 2.9
AK027362-1|BAB55063.1| 1287|Homo sapiens protein ( Homo sapiens ... 29 2.9
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 29 3.8
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 29 3.8
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 29 3.8
AL590648-6|CAH72658.1| 594|Homo sapiens family with sequence si... 27 8.8
AF059318-1|AAG43115.1| 212|Homo sapiens My002 protein protein. 27 8.8
>BC035007-1|AAH35007.1| 594|Homo sapiens family with sequence
similarity 71, member A protein.
Length = 594
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 306 PFYIQLSADHISISDETARCLRLVCYVLDLDIFQYSRTISVCFIQLITR 160
P+Y S +S+ D T L+ Y + DIF+Y+ FIQ+ R
Sbjct: 8 PYYTAQSGSSMSMFDTTMGKLQRQLYKGEYDIFKYAPIFESDFIQITKR 56
>AK074076-1|BAB84902.1| 772|Homo sapiens FLJ00147 protein protein.
Length = 772
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 25 DRTTRAMSSHLINEKYHNDTKINTLNAFTDKNLXPLSGRYRSKSLSSDKLNKTNADRAAI 204
DR+T ++ S +++ + +DT N NA PL+ S S++S + K N +
Sbjct: 348 DRSTSSVDSDILSSSHSSDTLCNADNA-----QIPLANGLDSHSITSSRRTKANEGKKET 402
Query: 205 LEDVEVQYITD 237
+ E TD
Sbjct: 403 WDTAEEDSGTD 413
>AK027362-1|BAB55063.1| 1287|Homo sapiens protein ( Homo sapiens cDNA
FLJ14456 fis, clone HEMBB1001915, moderately similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 64E (EC 3.1.2.15).
).
Length = 1287
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 25 DRTTRAMSSHLINEKYHNDTKINTLNAFTDKNLXPLSGRYRSKSLSSDKLNKTNADRAAI 204
DR+T ++ S +++ + +DT N NA PL+ S S++S + K N +
Sbjct: 863 DRSTSSVDSDILSSSHSSDTLCNADNA-----QIPLANGLDSHSITSSRRTKANEGKKET 917
Query: 205 LEDVEVQYITD 237
+ E TD
Sbjct: 918 WDTAEEDSGTD 928
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 22 IDRTTRAMSSHLINEKYHNDTKINTLNAFTD------KNLXPLSGRYRSKSLSSDKLNKT 183
+++ A+ S L + K D + T+ + + K+ LS R K+L+ DKL KT
Sbjct: 1362 LEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKT 1421
Query: 184 NADRAAILEDVEV 222
L+D+ V
Sbjct: 1422 KNRLQQELDDLTV 1434
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 22 IDRTTRAMSSHLINEKYHNDTKINTLNAFTD------KNLXPLSGRYRSKSLSSDKLNKT 183
+++ A+ S L + K D + T+ + + K+ LS R K+L+ DKL KT
Sbjct: 1362 LEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKT 1421
Query: 184 NADRAAILEDVEV 222
L+D+ V
Sbjct: 1422 KNRLQQELDDLTV 1434
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 22 IDRTTRAMSSHLINEKYHNDTKINTLNAFTD------KNLXPLSGRYRSKSLSSDKLNKT 183
+++ A+ S L + K D + T+ + + K+ LS R K+L+ DKL KT
Sbjct: 1404 LEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKT 1463
Query: 184 NADRAAILEDVEV 222
L+D+ V
Sbjct: 1464 KNRLQQELDDLTV 1476
>AL590648-6|CAH72658.1| 594|Homo sapiens family with sequence
similarity 71, member A protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 306 PFYIQLSADHISISDETARCLRLVCYVLDLDIFQYSRTISVCFIQLITR 160
P+Y S +S+ + T L+ Y + DIF+Y+ FIQ+ R
Sbjct: 8 PYYTAQSGSSMSMFNTTMGKLQRQLYKGEYDIFKYAPIFESDFIQITKR 56
>AF059318-1|AAG43115.1| 212|Homo sapiens My002 protein protein.
Length = 212
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 25 DRTTRAMSSHLINEKYHNDTKINTLNAFTDKNLXPLSGRYRSKSLSSDKLNKTN 186
DR+T ++ S +++ + +DT N NA PL+ S S++S + K N
Sbjct: 148 DRSTSSVDSDILSSSHSSDTLCNADNA-----QIPLANGLDSHSITSSRRTKAN 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.128 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,354,680
Number of Sequences: 237096
Number of extensions: 571048
Number of successful extensions: 4336
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4336
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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