Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt28a12
(313 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 2.0
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 2.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 2.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 2.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 2.6
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 3.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 4.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 6.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 6.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 6.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 6.0
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 139 RYRSKSLSSDKLNKTNADRAAILEDVEVQYITDKS 243
R RSK S DK + + I+ + YI++ S
Sbjct: 60 RERSKERSRDKRERERSKERKIISSLSNNYISNIS 94
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 2.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 139 RYRSKSLSSDKLNKTNADRAAILEDVEVQYITDKS 243
R RSK S DK + + I+ + YI++ S
Sbjct: 60 RERSKERSRDKRERERSKERKIISSLSNNYISNIS 94
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 2.6
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = -3
Query: 257 QPGVSDLSVMYWTSTSSNIAARSAFVLFNLSLDKLF 150
QPGV+ V W ++ + +FN K F
Sbjct: 653 QPGVTAFIVTSWLGYMNSFVNPVIYTVFNPEFRKAF 688
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 2.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +1
Query: 136 GRYRSKSL---SSDKLNKTNADRAAILED 213
G RSKS S DK N +N + IL D
Sbjct: 76 GSERSKSRSPDSRDKSNTSNTSKTIILSD 104
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 2.6
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 151 KSLSSDKLNKTNADRAAILEDVEVQY-ITDKSETPGCLVGNRDMVSGQLN 297
++L + N+TN+D IL + ++ +T K G V M LN
Sbjct: 272 RNLMDEHSNRTNSDPRMILTEAYTEFNLTIKYYKSGSTVPFNFMFIADLN 321
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.0 bits (42), Expect = 3.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 70 YHNDTKINTLNAF 108
Y DTK N LNA+
Sbjct: 49 YRQDTKNNLLNAY 61
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 20.6 bits (41), Expect = 4.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 181 FYSTYH*TNFSIYIYH 134
FY T++ TN Y+Y+
Sbjct: 375 FYPTFNQTNVDQYLYN 390
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.2 bits (40), Expect = 6.0
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -3
Query: 233 VMYWTSTSSNIAARSAFVLFNL 168
+ W S I AF++FN+
Sbjct: 440 IAQWIDRRSRIVFPVAFIIFNI 461
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 6.0
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 293 SCPLTISLFPTRQPGVSDLSVMY-WTS 216
SCP+ + L+P + S Y WT+
Sbjct: 159 SCPMNLKLYPLDRQVCSLRMASYGWTT 185
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 6.0
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 293 SCPLTISLFPTRQPGVSDLSVMY-WTS 216
SCP+ + L+P + S Y WT+
Sbjct: 159 SCPMNLKLYPLDRQVCSLRMASYGWTT 185
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 6.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 191 SAFVLFNLSLDKLFDLYLPL 132
S+FVL +S+D+ + + PL
Sbjct: 125 SSFVLVCISMDRYYAVIKPL 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.128 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,948
Number of Sequences: 438
Number of extensions: 1487
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6595479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.0 bits)
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