Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27p14
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   6.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.7  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   6.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 213 LPDQPLKEDEQLVCDHSAYVMLHQAQTGAPCLS 311
           LPD PL++D  +  D +      +A+  AP  S
Sbjct: 699 LPDPPLEDDSDVPLDFTVGSQGKEAERDAPTSS 731


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 269 CDAASGSNWSPM 304
           C + SG +WSPM
Sbjct: 735 CSSVSGGDWSPM 746


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 534 FIKHQGCVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAV 662
           F+   GC N+IR   F+++      + L RV ++  +++ + V
Sbjct: 73  FVDCSGCGNKIRVHIFEHAANHHHLAHLARVGLYGSSRKQKPV 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,260
Number of Sequences: 2352
Number of extensions: 11901
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)