Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27p09
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 95 6e-20
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 95 6e-20
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 95 6e-20
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 95 6e-20
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 95 6e-20
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 95 6e-20
X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein ... 88 9e-18
AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p pro... 88 9e-18
AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-P... 88 9e-18
AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-P... 88 9e-18
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 76 5e-14
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 76 5e-14
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 76 5e-14
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 74 2e-13
AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p pro... 54 2e-07
AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA... 54 2e-07
AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA... 54 2e-07
BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p pro... 41 0.002
BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p pro... 41 0.002
AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B prot... 41 0.002
AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E prote... 41 0.002
AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-P... 41 0.002
AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA... 41 0.002
BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p pro... 40 0.002
AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro pro... 40 0.002
AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-P... 40 0.002
AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p pro... 40 0.003
AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-P... 40 0.003
X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain pro... 39 0.005
U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain... 39 0.005
BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p pro... 39 0.005
AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p pro... 39 0.005
AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA... 39 0.005
BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p pro... 39 0.007
AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA... 39 0.007
AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protei... 34 0.20
AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB... 34 0.20
AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA... 34 0.20
X89811-1|CAA61938.1| 393|Drosophila melanogaster ssrp2 protein. 33 0.26
X81456-1|CAA57212.1| 328|Drosophila melanogaster protein ( D.me... 33 0.26
U13881-1|AAA50238.1| 393|Drosophila melanogaster DNA-binding pr... 33 0.26
AY060841-1|AAL28389.1| 385|Drosophila melanogaster GM02110p pro... 33 0.26
AE014298-2374|AAF48594.2| 385|Drosophila melanogaster CG12223-P... 33 0.26
AE014298-2373|AAN09396.1| 385|Drosophila melanogaster CG12223-P... 33 0.26
AE014298-2372|AAN09395.1| 385|Drosophila melanogaster CG12223-P... 33 0.26
AE014298-2371|AAN09394.2| 386|Drosophila melanogaster CG12223-P... 33 0.26
AE014298-2370|AAS65386.1| 393|Drosophila melanogaster CG12223-P... 33 0.26
BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p pro... 31 1.8
AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA... 31 1.8
AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB... 31 1.8
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 95.5 bits (227), Expect = 6e-20
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = +1
Query: 112 MTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXX 291
M+D PKRP+SAY+LWLN A IK +NPG+KVTE+AK+ GE+WR+M DKSEW
Sbjct: 1 MSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAK 60
Query: 292 XQYXVHLXSFNANGG 336
Y + F ANGG
Sbjct: 61 DDYDRAVKEFEANGG 75
>X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein
protein.
Length = 111
Score = 88.2 bits (209), Expect = 9e-18
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXXXQ 297
D PKRP+SAY+LWLN IK DNPG KVT+IAK+ GE+WR + DK+EW +
Sbjct: 4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEE 63
Query: 298 YXVHLXSFNANGG 336
Y + + ANGG
Sbjct: 64 YNKAVKEYEANGG 76
>AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p
protein.
Length = 111
Score = 88.2 bits (209), Expect = 9e-18
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXXXQ 297
D PKRP+SAY+LWLN IK DNPG KVT+IAK+ GE+WR + DK+EW +
Sbjct: 4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEE 63
Query: 298 YXVHLXSFNANGG 336
Y + + ANGG
Sbjct: 64 YNKAVKEYEANGG 76
>AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-PB,
isoform B protein.
Length = 111
Score = 88.2 bits (209), Expect = 9e-18
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXXXQ 297
D PKRP+SAY+LWLN IK DNPG KVT+IAK+ GE+WR + DK+EW +
Sbjct: 4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEE 63
Query: 298 YXVHLXSFNANGG 336
Y + + ANGG
Sbjct: 64 YNKAVKEYEANGG 76
>AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-PA,
isoform A protein.
Length = 111
Score = 88.2 bits (209), Expect = 9e-18
Identities = 37/73 (50%), Positives = 47/73 (64%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXXXXQ 297
D PKRP+SAY+LWLN IK DNPG KVT+IAK+ GE+WR + DK+EW +
Sbjct: 4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEE 63
Query: 298 YXVHLXSFNANGG 336
Y + + ANGG
Sbjct: 64 YNKAVKEYEANGG 76
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 75.8 bits (178), Expect = 5e-14
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXX 288
K + PKR +A++LWLN IK +NPG+KVTEIAKK GE+W+ + DKS+W
Sbjct: 550 KDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKD 609
Query: 289 XXQYXVHLXSFNANGGG 339
+Y + ++ GG
Sbjct: 610 KQRYHDEMRNYKPEAGG 626
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 75.8 bits (178), Expect = 5e-14
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXX 288
K + PKR +A++LWLN IK +NPG+KVTEIAKK GE+W+ + DKS+W
Sbjct: 550 KDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKD 609
Query: 289 XXQYXVHLXSFNANGGG 339
+Y + ++ GG
Sbjct: 610 KQRYHDEMRNYKPEAGG 626
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 75.8 bits (178), Expect = 5e-14
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXX 288
K + PKR +A++LWLN IK +NPG+KVTEIAKK GE+W+ + DKS+W
Sbjct: 550 KDSGKPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKD 609
Query: 289 XXQYXVHLXSFNANGGG 339
+Y + ++ GG
Sbjct: 610 KQRYHDEMRNYKPEAGG 626
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 73.7 bits (173), Expect = 2e-13
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSEWXXXXXXX 288
K + PKR +A++LWLN K +NPG+KVTEIAKK GE+W+ + DKS+W
Sbjct: 550 KDSGKPKRATTAFMLWLNDTRESYKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKD 609
Query: 289 XXQYXVHLXSFNANGGG 339
+Y + ++ GG
Sbjct: 610 KQRYHDEMRNYKPEAGG 626
>AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p
protein.
Length = 138
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 124 PKRPMSAYLLWLNXAX-SXIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWXXXXXXXXX 294
PK+PMSA++LW+N I+ ++P V E++ K GE+WR+M D K W
Sbjct: 8 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMA 67
Query: 295 QYXVHLXSFNA 327
+Y L +NA
Sbjct: 68 EYKEKLEKWNA 78
>AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA
protein.
Length = 133
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 124 PKRPMSAYLLWLNXAX-SXIKDDNPGLKVTEIAKKAGEIWRSMYD--KSEWXXXXXXXXX 294
PK+PMSA++LW+N I+ ++P V E++ K GE+WR+M D K W
Sbjct: 8 PKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMA 67
Query: 295 QYXVHLXSFNA 327
+Y L +NA
Sbjct: 68 EYKEKLEKWNA 78
>AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA
protein.
Length = 126
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +1
Query: 124 PKRPMSAYLLWLNXAX-SXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE--WXXXXXXXXX 294
PK+PMSA++LW+N IK ++P V E++ K GE+WR+M D+ + W
Sbjct: 8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMA 67
Query: 295 QYXVHLXSFN 324
+Y L +N
Sbjct: 68 EYKEKLKQWN 77
>BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p
protein.
Length = 784
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
+RPM+A+++W + D+NP L +++K G+ WRS+
Sbjct: 216 RRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p
protein.
Length = 784
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
+RPM+A+++W + D+NP L +++K G+ WRS+
Sbjct: 216 RRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B protein
protein.
Length = 529
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W A + P L+ +E++K G++W+++ D +
Sbjct: 78 KRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDK 123
>AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E protein
protein.
Length = 718
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
+RPM+A+++W + D+NP L +++K G+ WRS+
Sbjct: 216 RRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-PA
protein.
Length = 529
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W A + P L+ +E++K G++W+++ D +
Sbjct: 78 KRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDK 123
>AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA
protein.
Length = 784
Score = 40.7 bits (91), Expect = 0.002
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
+RPM+A+++W + D+NP L +++K G+ WRS+
Sbjct: 216 RRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>BT001514-1|AAN71269.1| 572|Drosophila melanogaster LD44245p
protein.
Length = 572
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
D KRPM+A+++W + DNP + +EI+K+ G W+ + + +
Sbjct: 177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEK 225
>AJ252124-1|CAB64386.1| 571|Drosophila melanogaster SoxNeuro
protein.
Length = 571
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
D KRPM+A+++W + DNP + +EI+K+ G W+ + + +
Sbjct: 176 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEK 224
>AE014134-1564|AAF52712.1| 572|Drosophila melanogaster CG18024-PA
protein.
Length = 572
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
D KRPM+A+++W + DNP + +EI+K+ G W+ + + +
Sbjct: 177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEK 225
>AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p
protein.
Length = 571
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + ++ +
Sbjct: 249 KRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEK 294
>AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-PA
protein.
Length = 571
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + ++ +
Sbjct: 249 KRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEK 294
>X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain
protein protein.
Length = 382
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + + +
Sbjct: 143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEK 188
>U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain
protein protein.
Length = 382
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + + +
Sbjct: 143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEK 188
>BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p
protein.
Length = 382
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + + +
Sbjct: 143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEK 188
>AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p
protein.
Length = 381
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + + +
Sbjct: 142 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEK 187
>AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA
protein.
Length = 382
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSMYDKSE 264
KRPM+A+++W I DNP + +EI+K+ G W+ + + +
Sbjct: 143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEK 188
>BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p
protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWR 243
D KRPM+A+++W + DNP + +EI+K+ G W+
Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWK 160
>AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA
protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 118 DXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWR 243
D KRPM+A+++W + DNP + +EI+K+ G W+
Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWK 160
>AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protein
protein.
Length = 470
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWR 243
KRPM+A+++W I + P L EI+K+ G W+
Sbjct: 186 KRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 224
>AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB,
isoform B protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWR 243
KRPM+A+++W I + P L EI+K+ G W+
Sbjct: 188 KRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 226
>AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA,
isoform A protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWR 243
KRPM+A+++W I + P L EI+K+ G W+
Sbjct: 188 KRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQ 226
>X89811-1|CAA61938.1| 393|Drosophila melanogaster ssrp2 protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 266 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 309
>X81456-1|CAA57212.1| 328|Drosophila melanogaster protein (
D.melanogaster mRNAfor an open reading frame. ).
Length = 328
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 201 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 244
>U13881-1|AAA50238.1| 393|Drosophila melanogaster DNA-binding
protein protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 266 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 309
>AY060841-1|AAL28389.1| 385|Drosophila melanogaster GM02110p
protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 258 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 301
>AE014298-2374|AAF48594.2| 385|Drosophila melanogaster CG12223-PC,
isoform C protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 258 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 301
>AE014298-2373|AAN09396.1| 385|Drosophila melanogaster CG12223-PB,
isoform B protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 258 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 301
>AE014298-2372|AAN09395.1| 385|Drosophila melanogaster CG12223-PA,
isoform A protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 258 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 301
>AE014298-2371|AAN09394.2| 386|Drosophila melanogaster CG12223-PD,
isoform D protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 259 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 302
>AE014298-2370|AAS65386.1| 393|Drosophila melanogaster CG12223-PE,
isoform E protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 109 KMTDXPKRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIW 240
K + PKR +SA+ + N + +K NP V +IAK+ G W
Sbjct: 266 KDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKW 309
>BT011194-1|AAR88556.1| 398|Drosophila melanogaster LD16247p
protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
KRPM+A+++W I P + + I+K G W++M
Sbjct: 204 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAM 244
>AE014135-142|AAF59408.1| 580|Drosophila melanogaster CG11153-PA,
isoform A protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
KRPM+A+++W I P + + I+K G W++M
Sbjct: 386 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAM 426
>AE014135-141|AAX52518.1| 618|Drosophila melanogaster CG11153-PB,
isoform B protein.
Length = 618
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 127 KRPMSAYLLWLNXAXSXIKDDNPGLKVTEIAKKAGEIWRSM 249
KRPM+A+++W I P + + I+K G W++M
Sbjct: 424 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAM 464
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,487,273
Number of Sequences: 53049
Number of extensions: 273848
Number of successful extensions: 582
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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