Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27o07
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13709-1|CAA74038.1| 313|Homo sapiens caudal-type homeobox prot... 87 3e-17
U51096-1|AAB40603.1| 311|Homo sapiens homeobox protein Cdx2 pro... 87 3e-17
BC014461-1|AAH14461.1| 313|Homo sapiens caudal type homeobox tr... 87 3e-17
AL591024-2|CAH70633.1| 313|Homo sapiens caudal type homeobox tr... 87 3e-17
AJ278431-1|CAB94779.1| 313|Homo sapiens caudal type homeobox tr... 87 3e-17
AF007886-1|AAD05200.1| 313|Homo sapiens caudal-type homeobox pr... 87 3e-17
U51095-1|AAB40602.1| 265|Homo sapiens homeobox protein Cdx1 pro... 80 4e-15
U15212-1|AAC50237.1| 203|Homo sapiens caudal-type homeobox prot... 80 4e-15
BC127122-1|AAI27123.2| 154|Homo sapiens CDX1 protein protein. 80 4e-15
BC096252-1|AAH96252.2| 154|Homo sapiens CDX1 protein protein. 80 4e-15
AF239666-1|AAF61234.1| 265|Homo sapiens CDX1 homeobox protein p... 80 4e-15
BC096251-1|AAH96251.1| 130|Homo sapiens CDX1 protein protein. 77 3e-14
BC128233-1|AAI28234.1| 284|Homo sapiens caudal type homeobox 4 ... 73 5e-13
AL450108-1|CAI40795.1| 284|Homo sapiens caudal type homeobox tr... 73 5e-13
AF029879-1|AAD01894.1| 284|Homo sapiens caudal-4 protein. 73 5e-13
AF003530-1|AAB66319.1| 284|Homo sapiens homeobox protein CDX4 p... 73 5e-13
X07495-1|CAA30376.1| 264|Homo sapiens protein ( Human mRNA for ... 49 1e-05
AY014298-1|AAG42145.1| 264|Homo sapiens HOXC4 protein. 49 1e-05
S82986-1|AAB46892.1| 235|Homo sapiens HOXC6 protein. 48 2e-05
M16938-1|AAA36007.1| 153|Homo sapiens protein ( Human homeo box... 48 2e-05
CR456954-1|CAG33235.1| 235|Homo sapiens HOXC6 protein. 48 2e-05
BC074845-1|AAH74845.1| 235|Homo sapiens homeobox C6 protein. 48 2e-05
BC074844-1|AAH74844.1| 235|Homo sapiens homeobox C6 protein. 48 2e-05
BC050442-1|AAH50442.1| 264|Homo sapiens homeobox C4 protein. 48 2e-05
BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein. 48 2e-05
AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein pr... 48 2e-05
AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein. 48 2e-05
AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein. 48 2e-05
X17360-1|CAA35237.1| 255|Homo sapiens hox 5.1 protein protein. 47 4e-05
X04706-1|CAA28411.1| 255|Homo sapiens protein ( Human homeobox ... 47 4e-05
BC074797-1|AAH74797.1| 255|Homo sapiens homeobox D4 protein. 47 4e-05
BC016763-1|AAH16763.1| 255|Homo sapiens homeobox D4 protein. 47 4e-05
X58431-1|CAA41335.1| 224|Homo sapiens HOX 2.2 protein. 45 2e-04
M26679-1|AAA58663.1| 270|Homo sapiens HOX 1.3 protein. 45 2e-04
CR542256-1|CAG47052.1| 270|Homo sapiens HOXA5 protein. 45 2e-04
BT009744-1|AAP88746.1| 270|Homo sapiens homeo box A5 protein. 45 2e-04
BC014651-1|AAH14651.1| 224|Homo sapiens homeobox B6 protein. 45 2e-04
BC013682-1|AAH13682.1| 270|Homo sapiens homeobox A5 protein. 45 2e-04
AJ270993-1|CAB65909.1| 224|Homo sapiens homeobox protein protein. 45 2e-04
AF287967-2|AAG31552.1| 224|Homo sapiens homeobox B6 protein. 45 2e-04
M74297-1|AAA58664.1| 320|Homo sapiens Hox 1.4 protein. 44 3e-04
CR542277-1|CAG47073.1| 270|Homo sapiens HOXA5 protein. 43 6e-04
M16937-1|AAA36003.1| 217|Homo sapiens protein ( Human homeo box... 43 8e-04
X61755-1|CAA43894.1| 222|Homo sapiens homeoprotein HOX3D protein. 42 0.001
M30598-1|AAA36005.1| 99|Homo sapiens protein ( Human homeobox ... 41 0.003
BC104917-1|AAI04918.1| 233|Homo sapiens homeobox A6 protein. 41 0.003
BC104915-1|AAI04916.1| 233|Homo sapiens homeobox A6 protein. 41 0.003
BC069497-1|AAH69497.1| 233|Homo sapiens homeobox A6 protein. 41 0.003
BC015345-1|AAH15345.1| 217|Homo sapiens homeobox B7 protein. 41 0.003
X16174-1|CAA34296.1| 68|Homo sapiens HOX-2.6 protein (68 AA) p... 40 0.006
M92299-1|AAA52682.1| 269|Homo sapiens homeobox protein protein. 40 0.006
K02572-1|AAA52681.1| 118|Homo sapiens protein ( Human putative ... 40 0.006
BC117247-1|AAI17248.1| 269|Homo sapiens homeobox B5 protein. 40 0.006
AF287967-3|AAG31553.1| 269|Homo sapiens homeobox B5 protein. 40 0.006
M30597-1|AAA36004.1| 89|Homo sapiens protein ( Homo sapiens ho... 40 0.008
X84803-1|CAA59270.1| 229|Homo sapiens HOX 1.1 (A7) protein. 39 0.010
S49765-1|AAB19469.2| 120|Homo sapiens homeobox gene protein. 39 0.010
AJ005814-1|CAA06713.1| 230|Homo sapiens hoxA7 protein. 39 0.010
AF032095-1|AAD01939.2| 230|Homo sapiens homeobox protein HOXA7 ... 39 0.010
AF026397-1|AAB94604.1| 230|Homo sapiens homeobox transcription ... 39 0.010
M28199-1|AAA53290.1| 73|Homo sapiens homeobox protein protein. 38 0.018
BC126994-1|AAI26995.2| 118|Homo sapiens HOXA4 protein protein. 38 0.018
X03794-1|CAA27420.1| 70|Homo sapiens protein ( Human embryonic... 38 0.023
AK223249-1|BAD96969.1| 217|Homo sapiens homeo box B7 variant pr... 38 0.023
BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein. 36 0.094
AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein. 36 0.094
X16667-1|CAA34657.1| 431|Homo sapiens protein ( Human HOX2G mRN... 36 0.12
AF287967-5|AAG31555.1| 431|Homo sapiens homeobox B3 protein. 36 0.12
U82759-1|AAB40867.1| 271|Homo sapiens homeodomain protein HoxA9... 34 0.29
U81511-2|AAC23705.1| 268|Homo sapiens HOXA-9B protein. 34 0.29
U81511-1|AAC23704.1| 198|Homo sapiens HOXA-9A protein. 34 0.29
U41814-1|AAC50365.1| 86|Homo sapiens NUP98-HOXA9 fusion protei... 34 0.29
U41813-1|AAC50364.1| 129|Homo sapiens HOXA9 protein. 34 0.29
BT006990-1|AAP35636.1| 272|Homo sapiens homeo box A9 protein. 34 0.29
BC014477-1|AAH14477.1| 328|Homo sapiens homeobox D1 protein. 34 0.29
BC010023-1|AAH10023.1| 272|Homo sapiens homeobox A9 protein. 34 0.29
BC006537-1|AAH06537.1| 272|Homo sapiens homeobox A9 protein. 34 0.29
AF241528-1|AAG44444.1| 328|Homo sapiens homeobox-containing tra... 34 0.29
AF202118-1|AAG29939.1| 328|Homo sapiens HOX D1 protein protein. 34 0.29
AF010258-1|AAD08713.1| 272|Homo sapiens homeodomain protein pro... 34 0.29
X59373-1|CAA42017.1| 340|Homo sapiens homeobox protein protein. 34 0.38
X58430-1|CAB86198.1| 496|Homo sapiens homeobox protein protein. 34 0.38
M30599-1|AAA36006.1| 83|Homo sapiens protein ( Human homeobox ... 34 0.38
BT009921-1|AAP88923.1| 342|Homo sapiens homeo box C10 protein. 34 0.38
BC094807-1|AAH94807.1| 94|Homo sapiens HOXA10 protein protein. 34 0.38
BC074760-1|AAH74760.1| 340|Homo sapiens homeobox D10 protein. 34 0.38
BC071843-1|AAH71843.1| 94|Homo sapiens HOXA10 protein protein. 34 0.38
BC069619-1|AAH69619.1| 340|Homo sapiens homeo box D10 protein. 34 0.38
BC013971-1|AAH13971.1| 393|Homo sapiens homeobox A10 protein. 34 0.38
BC001293-1|AAH01293.1| 342|Homo sapiens homeobox C10 protein. 34 0.38
AF255675-1|AAF67759.1| 342|Homo sapiens homeoprotein C10 protein. 34 0.38
AF040714-1|AAB96917.1| 393|Homo sapiens homeobox protein A10 pr... 34 0.38
Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein. 33 0.50
X16665-1|CAA34655.1| 356|Homo sapiens protein ( Human HOX2H mRN... 33 0.50
X16176-1|CAA34298.1| 77|Homo sapiens HOX-2.8 protein (77 AA) p... 33 0.50
X14571-1|CAA32709.1| 60|Homo sapiens K8 homeo protein protein. 33 0.50
D11117-1|BAA01891.1| 416|Homo sapiens homeodomain protein protein. 33 0.50
BC130571-1|AAI30572.1| 376|Homo sapiens homeobox A2 protein. 33 0.50
BC074806-1|AAH74806.1| 356|Homo sapiens homeobox B2 protein. 33 0.50
BC074805-1|AAH74805.1| 356|Homo sapiens homeobox B2 protein. 33 0.50
BC015565-1|AAH15565.1| 250|Homo sapiens HOXB9 protein protein. 33 0.50
BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein. 33 0.50
BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein. 33 0.50
AY014296-1|AAG42144.1| 250|Homo sapiens HOXB9 protein. 33 0.50
AC004079-2|AAS00375.1| 376|Homo sapiens unknown protein. 33 0.50
X99685-1|CAA68000.1| 39|Homo sapiens HOXC10 protein. 33 0.66
U59298-1|AAD10852.1| 431|Homo sapiens hox homeobox transcriptio... 33 0.66
S69023-1|AAD14028.1| 39|Homo sapiens HOX B6 protein. 33 0.66
X16175-1|CAA34297.1| 66|Homo sapiens HOX-2.7 protein (66 AA) p... 33 0.87
X16172-1|CAA34294.1| 78|Homo sapiens HOX-2.5 protein (78 AA) p... 32 1.2
AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein. 32 1.2
X59372-1|CAA42016.1| 342|Homo sapiens homeobox protein protein. 32 1.5
X16173-1|CAA34295.1| 70|Homo sapiens HOX-2.4 protein (70 AA) p... 32 1.5
X15506-1|CAA33528.1| 79|Homo sapiens Hox5.2 gene product (79 A... 32 1.5
L11239-1|AAA36002.1| 139|Homo sapiens homeobox protein protein. 32 1.5
BC053898-1|AAH53898.1| 242|Homo sapiens homeobox C8 protein. 32 1.5
BC053894-1|AAH53894.1| 260|Homo sapiens homeobox C9 protein. 32 1.5
BC044855-1|AAH44855.2| 342|Homo sapiens homeobox D9 protein. 32 1.5
BC032769-1|AAH32769.1| 263|Homo sapiens HOXC9 protein protein. 32 1.5
AY014302-1|AAG42151.1| 260|Homo sapiens HOXC9 protein. 32 1.5
AY014300-1|AAG42146.1| 242|Homo sapiens HOXC8 protein. 32 1.5
AY014294-1|AAG42143.1| 243|Homo sapiens HOXB8 protein. 32 1.5
AK096222-1|BAC04730.1| 243|Homo sapiens protein ( Homo sapiens ... 32 1.5
U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein. 31 2.0
U02080-1|AAA17406.1| 133|Homo sapiens homeobox protein protein. 31 2.0
AF118452-1|AAD39907.1| 348|Homo sapiens homeobox protein GBX2 p... 31 2.0
AC079135-1|AAX93240.1| 348|Homo sapiens unknown protein. 31 2.0
X60299-1|CAA42841.1| 680|Homo sapiens KALIG-1 protein. 31 2.7
U37431-1|AAC50249.1| 330|Homo sapiens HOXA1 protein. 31 2.7
U10421-1|AAA86954.1| 335|Homo sapiens HOX A1 homeodomain protei... 31 2.7
S79910-1|AAB35423.2| 330|Homo sapiens HOXA1 protein. 31 2.7
S60085-1|AAB20108.1| 679|Homo sapiens ADMLX protein. 31 2.7
M97252-1|AAA59202.1| 680|Homo sapiens KAL protein. 31 2.7
BC032547-1|AAH32547.1| 335|Homo sapiens homeobox A1 protein. 31 2.7
AC004079-1|AAS00374.1| 335|Homo sapiens unknown protein. 31 2.7
Z83853-1|CAI18752.1| 245|Homo sapiens protein ( Human DNA seque... 31 3.5
X99681-1|CAA67997.1| 49|Homo sapiens HOXC8 protein. 31 3.5
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 31 3.5
X15507-1|CAA33529.1| 95|Homo sapiens Hox5.4 gene product (AA 1... 31 3.5
BC113633-1|AAI13634.1| 245|Homo sapiens intestine-specific home... 31 3.5
BC112212-1|AAI12213.1| 245|Homo sapiens intestine-specific home... 31 3.5
BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein. 31 3.5
BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein. 31 3.5
BC001543-1|AAH01543.1| 304|Homo sapiens homeobox C11 protein. 31 3.5
AL024494-1|CAI19818.1| 245|Homo sapiens protein ( Human DNA seq... 31 3.5
AJ000041-1|CAA03876.1| 304|Homo sapiens Hox protein protein. 31 3.5
BC041090-1|AAH41090.1| 239|Homo sapiens NK2 homeobox 8 protein. 30 4.6
AF000297-1|AAC71082.1| 239|Homo sapiens nk-2-related transcript... 30 4.6
AF000295-1|AAC71081.1| 239|Homo sapiens nk-2-related transcript... 30 4.6
X90828-1|CAA62342.1| 280|Homo sapiens Lbx1 transcription factor... 30 6.1
BT009908-1|AAP88910.1| 330|Homo sapiens homeo box C13 protein. 30 6.1
BC090850-1|AAH90850.1| 330|Homo sapiens homeobox C13 protein. 30 6.1
BC069156-1|AAH69156.1| 281|Homo sapiens ladybird homeobox 1 pro... 30 6.1
BC025788-1|AAH25788.1| 293|Homo sapiens NK2 transcription facto... 30 6.1
BC002754-1|AAH02754.1| 330|Homo sapiens HOXC13 protein protein. 30 6.1
AL353719-1|CAI16899.1| 364|Homo sapiens NK2 transcription facto... 30 6.1
AL135794-1|CAH72508.2| 281|Homo sapiens Ladybird homeobox homol... 30 6.1
AK024027-1|BAB14786.1| 146|Homo sapiens protein ( Homo sapiens ... 30 6.1
AJ438986-1|CAD27941.1| 330|Homo sapiens hypothetical protein pr... 30 6.1
AF263466-1|AAF73439.1| 330|Homo sapiens HOXC13 protein. 30 6.1
AF255676-1|AAF67760.1| 330|Homo sapiens homeoprotein C13 protein. 30 6.1
AF229631-1|AAF44651.1| 211|Homo sapiens homeobox protein NKX2-3... 30 6.1
BC075093-1|AAH75093.1| 273|Homo sapiens NK2 homeobox 2 protein. 29 8.1
BC075092-1|AAH75092.1| 273|Homo sapiens NK2 homeobox 2 protein. 29 8.1
BA000025-63|BAB63315.1| 136|Homo sapiens SPR1 protein. 29 8.1
AL773544-4|CAI18481.1| 136|Homo sapiens psoriasis susceptibilit... 29 8.1
AL662867-4|CAI17721.1| 136|Homo sapiens psoriasis susceptibilit... 29 8.1
AL662844-4|CAI18325.1| 136|Homo sapiens psoriasis susceptibilit... 29 8.1
AL133325-3|CAC00770.1| 273|Homo sapiens NK2 transcription facto... 29 8.1
AF484420-1|AAO49377.1| 136|Homo sapiens psoriasis susceptibilit... 29 8.1
AF019415-1|AAC83132.1| 273|Homo sapiens homeodomain protein pro... 29 8.1
AB202103-4|BAE78627.1| 136|Homo sapiens chromosome 6 open readi... 29 8.1
AB103620-3|BAF31284.1| 136|Homo sapiens hypothetical protein pr... 29 8.1
AB088114-3|BAC54949.1| 136|Homo sapiens hypothetical protein pr... 29 8.1
AB031480-1|BAA88131.1| 136|Homo sapiens SPR1 protein. 29 8.1
>Y13709-1|CAA74038.1| 313|Homo sapiens caudal-type homeobox protein
2 protein.
Length = 313
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 167 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 215
>U51096-1|AAB40603.1| 311|Homo sapiens homeobox protein Cdx2
protein.
Length = 311
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 165 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 213
>BC014461-1|AAH14461.1| 313|Homo sapiens caudal type homeobox
transcription factor 2 protein.
Length = 313
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 167 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 215
>AL591024-2|CAH70633.1| 313|Homo sapiens caudal type homeobox
transcription factor 2 protein.
Length = 313
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 167 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 215
>AJ278431-1|CAB94779.1| 313|Homo sapiens caudal type homeobox
transcription factor protein.
Length = 313
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 167 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 215
>AF007886-1|AAD05200.1| 313|Homo sapiens caudal-type homeobox
protein 2/3 protein.
Length = 313
Score = 87.4 bits (207), Expect = 3e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
EWM+KP Q+ + KTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 167 EWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 215
>U51095-1|AAB40602.1| 265|Homo sapiens homeobox protein Cdx1
protein.
Length = 265
Score = 80.2 bits (189), Expect = 4e-15
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPN-PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
YEWM++ GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 133 YEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 183
>U15212-1|AAC50237.1| 203|Homo sapiens caudal-type homeobox protein
protein.
Length = 203
Score = 80.2 bits (189), Expect = 4e-15
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPN-PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
YEWM++ GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 71 YEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 121
>BC127122-1|AAI27123.2| 154|Homo sapiens CDX1 protein protein.
Length = 154
Score = 80.2 bits (189), Expect = 4e-15
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPN-PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
YEWM++ GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 22 YEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 72
>BC096252-1|AAH96252.2| 154|Homo sapiens CDX1 protein protein.
Length = 154
Score = 80.2 bits (189), Expect = 4e-15
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPN-PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
YEWM++ GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 22 YEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 72
>AF239666-1|AAF61234.1| 265|Homo sapiens CDX1 homeobox protein
protein.
Length = 265
Score = 80.2 bits (189), Expect = 4e-15
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPN-PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
YEWM++ GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 133 YEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 183
>BC096251-1|AAH96251.1| 130|Homo sapiens CDX1 protein protein.
Length = 130
Score = 77.4 bits (182), Expect = 3e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
GKTRTKDKYRVVY+DHQRLELEKEFHYSRYITIRR
Sbjct: 14 GKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRR 48
>BC128233-1|AAI28234.1| 284|Homo sapiens caudal type homeobox 4
protein.
Length = 284
Score = 73.3 bits (172), Expect = 5e-13
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K T GKTRTK+KYRVVY+DHQRLELEKEFH +RYITI+R
Sbjct: 157 YAWMRKTVQVT----GKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQR 202
>AL450108-1|CAI40795.1| 284|Homo sapiens caudal type homeobox
transcription factor 4 protein.
Length = 284
Score = 73.3 bits (172), Expect = 5e-13
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K T GKTRTK+KYRVVY+DHQRLELEKEFH +RYITI+R
Sbjct: 157 YAWMRKTVQVT----GKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQR 202
>AF029879-1|AAD01894.1| 284|Homo sapiens caudal-4 protein.
Length = 284
Score = 73.3 bits (172), Expect = 5e-13
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K T GKTRTK+KYRVVY+DHQRLELEKEFH +RYITI+R
Sbjct: 157 YAWMRKTVQVT----GKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQR 202
>AF003530-1|AAB66319.1| 284|Homo sapiens homeobox protein CDX4
protein.
Length = 284
Score = 73.3 bits (172), Expect = 5e-13
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K T GKTRTK+KYRVVY+DHQRLELEKEFH +RYITI+R
Sbjct: 157 YAWMRKTVQVT----GKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQR 202
>X07495-1|CAA30376.1| 264|Homo sapiens protein ( Human mRNA for
cp19 homeobox from HOX-3 locus. ).
Length = 264
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 136 YPWMKKIHVSTVNPNYNGGEPK-RSRAAYTRQQVLELEKEFHYNRYLTRRR 185
>AY014298-1|AAG42145.1| 264|Homo sapiens HOXC4 protein.
Length = 264
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 136 YPWMKKIHVSTVNPNYNGGEPK-RSRAAYTRQQVLELEKEFHYNRYLTRRR 185
>S82986-1|AAB46892.1| 235|Homo sapiens HOXC6 protein.
Length = 235
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G R + R +YS +Q LELEKEFH++RY+T RR
Sbjct: 123 YPWMQRMNSHSGVGYGADRRRG--RQIYSRYQTLELEKEFHFNRYLTRRR 170
>M16938-1|AAA36007.1| 153|Homo sapiens protein ( Human homeo box c8
protein, mRNA, complete cds. ).
Length = 153
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G R + R +YS +Q LELEKEFH++RY+T RR
Sbjct: 41 YPWMQRMNSHSGVGYGADRRRG--RQIYSRYQTLELEKEFHFNRYLTRRR 88
>CR456954-1|CAG33235.1| 235|Homo sapiens HOXC6 protein.
Length = 235
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G R + R +YS +Q LELEKEFH++RY+T RR
Sbjct: 123 YPWMQRMNSHSGVGYGADRRRG--RQIYSRYQTLELEKEFHFNRYLTRRR 170
>BC074845-1|AAH74845.1| 235|Homo sapiens homeobox C6 protein.
Length = 235
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G R + R +YS +Q LELEKEFH++RY+T RR
Sbjct: 123 YPWMQRMNSHSGVGYGADRRRG--RQIYSRYQTLELEKEFHFNRYLTRRR 170
>BC074844-1|AAH74844.1| 235|Homo sapiens homeobox C6 protein.
Length = 235
Score = 48.4 bits (110), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G R + R +YS +Q LELEKEFH++RY+T RR
Sbjct: 123 YPWMQRMNSHSGVGYGADRRRG--RQIYSRYQTLELEKEFHFNRYLTRRR 170
>BC050442-1|AAH50442.1| 264|Homo sapiens homeobox C4 protein.
Length = 264
Score = 48.0 bits (109), Expect = 2e-05
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + T NP + K R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 136 YPWMKKIHVSTV-NPSYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
>BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 48.0 bits (109), Expect = 2e-05
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 142 YPWMRKVHVSTVNPNYAGGEPK-RSRTAYTRQQVLELEKEFHYNRYLTRRR 191
>AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 48.0 bits (109), Expect = 2e-05
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 137 YPWMRKVHVSTVNPNYAGGEPK-RSRTAYTRQQVLELEKEFHYNRYLTRRR 186
>AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein.
Length = 251
Score = 48.0 bits (109), Expect = 2e-05
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 142 YPWMRKVHVSTVNPNYAGGEPK-RSRTAYTRQQVLELEKEFHYNRYLTRRR 191
>AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 48.0 bits (109), Expect = 2e-05
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQT-QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + T PN K + R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 142 YPWMRKVHVSTVNPNYAGGEPK-RSRTAYTRQQVLELEKEFHYNRYLTRRR 191
>X17360-1|CAA35237.1| 255|Homo sapiens hox 5.1 protein protein.
Length = 255
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + + NP T + K R Y+ Q LELEKEFH++RY+T RR
Sbjct: 134 YPWMKKVHVNSV-NPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 183
>X04706-1|CAA28411.1| 255|Homo sapiens protein ( Human homeobox
gene (clone HHO.c13). ).
Length = 255
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + NP T + K R Y+ Q LELEKEFH++RY+T RR
Sbjct: 134 YPWMKKV-HANSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 183
>BC074797-1|AAH74797.1| 255|Homo sapiens homeobox D4 protein.
Length = 255
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + + NP T + K R Y+ Q LELEKEFH++RY+T RR
Sbjct: 134 YPWMKKVHVNSV-NPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 183
>BC016763-1|AAH16763.1| 255|Homo sapiens homeobox D4 protein.
Length = 255
Score = 47.2 bits (107), Expect = 4e-05
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + + NP T + K R Y+ Q LELEKEFH++RY+T RR
Sbjct: 134 YPWMKKVHVNSV-NPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 183
>X58431-1|CAA41335.1| 224|Homo sapiens HOX 2.2 protein.
Length = 224
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G + + R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 128 YPWMQRMNSCNSSSFGPSGRRG--RQTYTRYQTLELEKEFHYNRYLTRRR 175
>M26679-1|AAA58663.1| 270|Homo sapiens HOX 1.3 protein.
Length = 270
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + + N G K + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 177 YPWMRKLHI-SHDNIGGPEGK-RARTAYTRYQTLELEKEFHFNRYLTRRR 224
>CR542256-1|CAG47052.1| 270|Homo sapiens HOXA5 protein.
Length = 270
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + + N G K + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 177 YPWMRKLHI-SHDNIGGPEGK-RARTAYTRYQTLELEKEFHFNRYLTRRR 224
>BT009744-1|AAP88746.1| 270|Homo sapiens homeo box A5 protein.
Length = 270
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + + N G K + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 177 YPWMRKLHI-SHDNIGGPEGK-RARTAYTRYQTLELEKEFHFNRYLTRRR 224
>BC014651-1|AAH14651.1| 224|Homo sapiens homeobox B6 protein.
Length = 224
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G + + R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 128 YPWMQRMNSCNSSSFGPSGRRG--RQTYTRYQTLELEKEFHYNRYLTRRR 175
>BC013682-1|AAH13682.1| 270|Homo sapiens homeobox A5 protein.
Length = 270
Score = 45.2 bits (102), Expect = 2e-04
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + + N G K + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 177 YPWMRKLHI-SHDNIGGPEGK-RARTAYTRYQTLELEKEFHFNRYLTRRR 224
>AJ270993-1|CAB65909.1| 224|Homo sapiens homeobox protein protein.
Length = 224
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G + + R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 128 YPWMQRMNSCNSSSFGPSGRRG--RQTYTRYQTLELEKEFHYNRYLTRRR 175
>AF287967-2|AAG31552.1| 224|Homo sapiens homeobox B6 protein.
Length = 224
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N + G + + R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 128 YPWMQRMNSCNSSSFGPSGRRG--RQTYTRYQTLELEKEFHYNRYLTRRR 175
>M74297-1|AAA58664.1| 320|Homo sapiens Hox 1.4 protein.
Length = 320
Score = 44.4 bits (100), Expect = 3e-04
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
Y WMKK + NP + K R Y+ Q LELEKEFH++RY+T RR
Sbjct: 195 YPWMKKIHVSAV-NPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRR 244
>CR542277-1|CAG47073.1| 270|Homo sapiens HOXA5 protein.
Length = 270
Score = 43.2 bits (97), Expect = 6e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM+K + + N G K + R Y+ +Q LELEKEFH++ Y+T RR
Sbjct: 177 YPWMRKLHI-SHDNIGGPEGK-RARTAYTRYQTLELEKEFHFNHYLTRRR 224
>M16937-1|AAA36003.1| 217|Homo sapiens protein ( Human homeo box c1
protein, mRNA, complete cds. ).
Length = 217
Score = 42.7 bits (96), Expect = 8e-04
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 421 NYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
N++ P+ + T K R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 123 NFRIYPSMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRR 166
>X61755-1|CAA43894.1| 222|Homo sapiens homeoprotein HOX3D protein.
Length = 222
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM K + + + ++RT Y+ +Q LELEKEFH++RY+T RR
Sbjct: 141 YPWMTKLHMSHETDGKRSRTS------YTRYQTLELEKEFHFNRYLTRRR 184
>M30598-1|AAA36005.1| 99|Homo sapiens protein ( Human homeobox
protein mRNA, 3' end, clone HOX2.3. ).
Length = 99
Score = 40.7 bits (91), Expect = 0.003
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 23 RQTYTRYQTLELEKEFHYNRYLTRRR 48
>BC104917-1|AAI04918.1| 233|Homo sapiens homeobox A6 protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N G + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 137 YPWMQRMNSCAGAVYGSHGRRG--RQTYTRYQTLELEKEFHFNRYLTRRR 184
>BC104915-1|AAI04916.1| 233|Homo sapiens homeobox A6 protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N G + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 137 YPWMQRMNSCAGAVYGSHGRRG--RQTYTRYQTLELEKEFHFNRYLTRRR 184
>BC069497-1|AAH69497.1| 233|Homo sapiens homeobox A6 protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
Y WM++ N G + R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 137 YPWMQRMNSCAGAVYGSHGRRG--RQTYTRYQTLELEKEFHFNRYLTRRR 184
>BC015345-1|AAH15345.1| 217|Homo sapiens homeobox B7 protein.
Length = 217
Score = 40.7 bits (91), Expect = 0.003
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 141 RQTYTRYQTLELEKEFHYNRYLTRRR 166
>X16174-1|CAA34296.1| 68|Homo sapiens HOX-2.6 protein (68 AA)
protein.
Length = 68
Score = 39.9 bits (89), Expect = 0.006
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ Q LELEKEFHY+RY+T RR
Sbjct: 7 RTAYTRQQVLELEKEFHYNRYLTRRR 32
>M92299-1|AAA52682.1| 269|Homo sapiens homeobox protein protein.
Length = 269
Score = 39.9 bits (89), Expect = 0.006
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 198 RTAYTRYQTLELEKEFHFNRYLTRRR 223
>K02572-1|AAA52681.1| 118|Homo sapiens protein ( Human putative
homeo box Hu1. ).
Length = 118
Score = 39.9 bits (89), Expect = 0.006
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 47 RTAYTRYQTLELEKEFHFNRYLTRRR 72
>BC117247-1|AAI17248.1| 269|Homo sapiens homeobox B5 protein.
Length = 269
Score = 39.9 bits (89), Expect = 0.006
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 198 RTAYTRYQTLELEKEFHFNRYLTRRR 223
>AF287967-3|AAG31553.1| 269|Homo sapiens homeobox B5 protein.
Length = 269
Score = 39.9 bits (89), Expect = 0.006
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 198 RTAYTRYQTLELEKEFHFNRYLTRRR 223
>M30597-1|AAA36004.1| 89|Homo sapiens protein ( Homo sapiens
homeobox protein mRNA, partial cds. ).
Length = 89
Score = 39.5 bits (88), Expect = 0.008
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 481 YSDHQRLELEKEFHYSRYITIRR 549
Y+ +Q LELEKEFHY+RY+T RR
Sbjct: 18 YTRYQTLELEKEFHYNRYLTRRR 40
>X84803-1|CAA59270.1| 229|Homo sapiens HOX 1.1 (A7) protein.
Length = 229
Score = 39.1 bits (87), Expect = 0.010
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 133 RQTYTRYQTLELEKEFHFNRYLTRRR 158
>S49765-1|AAB19469.2| 120|Homo sapiens homeobox gene protein.
Length = 120
Score = 39.1 bits (87), Expect = 0.010
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 403 EWMKKPNYQTQPNPGKTRTKDKY-RVVYSDHQRLELEKEFHYSRYITIRR 549
++ + N++ P + T K R Y+ +Q LELE EFHY+RY+T RR
Sbjct: 20 DFAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELENEFHYNRYLTRRR 69
>AJ005814-1|CAA06713.1| 230|Homo sapiens hoxA7 protein.
Length = 230
Score = 39.1 bits (87), Expect = 0.010
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRR 159
>AF032095-1|AAD01939.2| 230|Homo sapiens homeobox protein HOXA7
protein.
Length = 230
Score = 39.1 bits (87), Expect = 0.010
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRR 159
>AF026397-1|AAB94604.1| 230|Homo sapiens homeobox transcription
factor HOXA7 protein.
Length = 230
Score = 39.1 bits (87), Expect = 0.010
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LELEKEFH++RY+T RR
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRR 159
>M28199-1|AAA53290.1| 73|Homo sapiens homeobox protein protein.
Length = 73
Score = 38.3 bits (85), Expect = 0.018
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ Q LELEKEFH++RY+T RR
Sbjct: 15 RTAYTRQQVLELEKEFHFNRYLTRRR 40
>BC126994-1|AAI26995.2| 118|Homo sapiens HOXA4 protein protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.018
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ Q LELEKEFH++RY+T RR
Sbjct: 17 RTAYTRQQVLELEKEFHFNRYLTRRR 42
>X03794-1|CAA27420.1| 70|Homo sapiens protein ( Human embryonic
mRNA 3' end with homoeo box (clone HHOc10). ).
Length = 70
Score = 37.9 bits (84), Expect = 0.023
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 481 YSDHQRLELEKEFHYSRYITIRR 549
Y+ +Q LELEKEFH++RY+T RR
Sbjct: 2 YTRYQTLELEKEFHFNRYLTRRR 24
>AK223249-1|BAD96969.1| 217|Homo sapiens homeo box B7 variant
protein.
Length = 217
Score = 37.9 bits (84), Expect = 0.023
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R Y+ +Q LEL KEFHY+RY+T RR
Sbjct: 141 RQTYTRYQTLELGKEFHYNRYLTRRR 166
>BC015180-1|AAH15180.1| 443|Homo sapiens homeobox A3 protein.
Length = 443
Score = 35.9 bits (79), Expect = 0.094
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 442 PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
PG+ +K + R Y+ Q +ELEKEFH++RY+
Sbjct: 186 PGQASSK-RARTAYTSAQLVELEKEFHFNRYL 216
>AC004079-3|AAS00376.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 35.9 bits (79), Expect = 0.094
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 442 PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
PG+ +K + R Y+ Q +ELEKEFH++RY+
Sbjct: 186 PGQASSK-RARTAYTSAQLVELEKEFHFNRYL 216
>X16667-1|CAA34657.1| 431|Homo sapiens protein ( Human HOX2G mRNA
from the Hox2 locus. ).
Length = 431
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 442 PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
PG +K + R Y+ Q +ELEKEFH++RY+
Sbjct: 183 PGSAASK-RARTAYTSAQLVELEKEFHFNRYL 213
>AF287967-5|AAG31555.1| 431|Homo sapiens homeobox B3 protein.
Length = 431
Score = 35.5 bits (78), Expect = 0.12
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 442 PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
PG +K + R Y+ Q +ELEKEFH++RY+
Sbjct: 183 PGSAASK-RARTAYTSAQLVELEKEFHFNRYL 213
>U82759-1|AAB40867.1| 271|Homo sapiens homeodomain protein HoxA9
protein.
Length = 271
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 203 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 231
>U81511-2|AAC23705.1| 268|Homo sapiens HOXA-9B protein.
Length = 268
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 200 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 228
>U81511-1|AAC23704.1| 198|Homo sapiens HOXA-9A protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 130 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 158
>U41814-1|AAC50365.1| 86|Homo sapiens NUP98-HOXA9 fusion protein
protein.
Length = 86
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 56 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 84
>U41813-1|AAC50364.1| 129|Homo sapiens HOXA9 protein.
Length = 129
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 61 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 89
>BT006990-1|AAP35636.1| 272|Homo sapiens homeo box A9 protein.
Length = 272
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 204 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 232
>BC014477-1|AAH14477.1| 328|Homo sapiens homeobox D1 protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.29
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNP----GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
+EWMK ++ G R +S Q ELEKEFH+++Y+T R
Sbjct: 205 FEWMKVKRNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRAR 258
>BC010023-1|AAH10023.1| 272|Homo sapiens homeobox A9 protein.
Length = 272
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 204 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 232
>BC006537-1|AAH06537.1| 272|Homo sapiens homeobox A9 protein.
Length = 272
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 204 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 232
>AF241528-1|AAG44444.1| 328|Homo sapiens homeobox-containing
transcripton factor HOXD1 protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.29
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNP----GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
+EWMK ++ G R +S Q ELEKEFH+++Y+T R
Sbjct: 205 FEWMKVKRNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRAR 258
>AF202118-1|AAG29939.1| 328|Homo sapiens HOX D1 protein protein.
Length = 328
Score = 34.3 bits (75), Expect = 0.29
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNP----GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
+EWMK ++ G R +S Q ELEKEFH+++Y+T R
Sbjct: 205 FEWMKVKRNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRAR 258
>AF010258-1|AAD08713.1| 272|Homo sapiens homeodomain protein
protein.
Length = 272
Score = 34.3 bits (75), Expect = 0.29
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ HQ LELEKEF ++ Y+T
Sbjct: 204 RSTRKKRCPYTKHQTLELEKEFLFNMYLT 232
>X59373-1|CAA42017.1| 340|Homo sapiens homeobox protein protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 268 KKRCPYTKHQTLELEKEFLFNMYLTRER 295
>X58430-1|CAB86198.1| 496|Homo sapiens homeobox protein protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 424 KKRCPYTKHQTLELEKEFLFNMYLTRER 451
>M30599-1|AAA36006.1| 83|Homo sapiens protein ( Human homeobox
protein mRNA, partial cds., clone PL1. ).
Length = 83
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 21 KKRCPYTKHQTLELEKEFLFNMYLTRER 48
>BT009921-1|AAP88923.1| 342|Homo sapiens homeo box C10 protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 270 KKRCPYTKHQTLELEKEFLFNMYLTRER 297
>BC094807-1|AAH94807.1| 94|Homo sapiens HOXA10 protein protein.
Length = 94
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 22 KKRCPYTKHQTLELEKEFLFNMYLTRER 49
>BC074760-1|AAH74760.1| 340|Homo sapiens homeobox D10 protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 268 KKRCPYTKHQTLELEKEFLFNMYLTRER 295
>BC071843-1|AAH71843.1| 94|Homo sapiens HOXA10 protein protein.
Length = 94
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 22 KKRCPYTKHQTLELEKEFLFNMYLTRER 49
>BC069619-1|AAH69619.1| 340|Homo sapiens homeo box D10 protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 268 KKRCPYTKHQTLELEKEFLFNMYLTRER 295
>BC013971-1|AAH13971.1| 393|Homo sapiens homeobox A10 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 321 KKRCPYTKHQTLELEKEFLFNMYLTRER 348
>BC001293-1|AAH01293.1| 342|Homo sapiens homeobox C10 protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 270 KKRCPYTKHQTLELEKEFLFNMYLTRER 297
>AF255675-1|AAF67759.1| 342|Homo sapiens homeoprotein C10 protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 270 KKRCPYTKHQTLELEKEFLFNMYLTRER 297
>AF040714-1|AAB96917.1| 393|Homo sapiens homeobox protein A10
protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.38
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYITIRR 549
K R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 321 KKRCPYTKHQTLELEKEFLFNMYLTRER 348
>Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein.
Length = 432
Score = 33.5 bits (73), Expect = 0.50
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
++ P P R R Y+ Q +ELEKEFH++RY+
Sbjct: 187 KSPPGPASKRV----RTAYTSAQLVELEKEFHFNRYL 219
>X16665-1|CAA34655.1| 356|Homo sapiens protein ( Human HOX2H mRNA
from the Hox2 locus. ).
Length = 356
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYL 168
>X16176-1|CAA34298.1| 77|Homo sapiens HOX-2.8 protein (77 AA)
protein.
Length = 77
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 14 RLRTAYTNTQLLELEKEFHFNKYL 37
>X14571-1|CAA32709.1| 60|Homo sapiens K8 homeo protein protein.
Length = 60
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 3 RLRTAYTNTQLLELEKEFHFNKYL 26
>D11117-1|BAA01891.1| 416|Homo sapiens homeodomain protein protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.50
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
++ P P R R Y+ Q +ELEKEFH++RY+
Sbjct: 171 KSPPGPASKRV----RTAYTSAQLVELEKEFHFNRYL 203
>BC130571-1|AAI30572.1| 376|Homo sapiens homeobox A2 protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYL 168
>BC074806-1|AAH74806.1| 356|Homo sapiens homeobox B2 protein.
Length = 356
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYL 168
>BC074805-1|AAH74805.1| 356|Homo sapiens homeobox B2 protein.
Length = 356
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYL 168
>BC015565-1|AAH15565.1| 250|Homo sapiens HOXB9 protein protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.50
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 427 QTQPNPG--KTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QT P+ R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 172 QTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLT 211
>BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 33.5 bits (73), Expect = 0.50
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
++ P P R R Y+ Q +ELEKEFH++RY+
Sbjct: 187 KSPPGPASKRV----RTAYTSAQLVELEKEFHFNRYL 219
>BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 33.5 bits (73), Expect = 0.50
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
++ P P R R Y+ Q +ELEKEFH++RY+
Sbjct: 187 KSPPGPASKRV----RTAYTSAQLVELEKEFHFNRYL 219
>AY014296-1|AAG42144.1| 250|Homo sapiens HOXB9 protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.50
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 427 QTQPNPG--KTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QT P+ R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 172 QTNPSANWLHARSSRKKRCPYTKYQTLELEKEFLFNMYLT 211
>AC004079-2|AAS00375.1| 376|Homo sapiens unknown protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.50
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 466 KYRVVYSDHQRLELEKEFHYSRYI 537
+ R Y++ Q LELEKEFH+++Y+
Sbjct: 145 RLRTAYTNTQLLELEKEFHFNKYL 168
>X99685-1|CAA68000.1| 39|Homo sapiens HOXC10 protein.
Length = 39
Score = 33.1 bits (72), Expect = 0.66
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 451 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
T + R Y+ HQ LELEKEF ++ Y+T R
Sbjct: 7 TGKSGRKRCPYTKHQTLELEKEFLFNMYLTRER 39
>U59298-1|AAD10852.1| 431|Homo sapiens hox homeobox transcription
factor HOXB3 protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.66
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 442 PGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
PG +K + R Y+ +ELEKEFH++RY+
Sbjct: 183 PGSAASK-RARTAYTSAHVVELEKEFHFNRYL 213
>S69023-1|AAD14028.1| 39|Homo sapiens HOX B6 protein.
Length = 39
Score = 33.1 bits (72), Expect = 0.66
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 502 ELEKEFHYSRYITIRR 549
ELEKEFHY+RY+T RR
Sbjct: 2 ELEKEFHYNRYLTRRR 17
>X16175-1|CAA34297.1| 66|Homo sapiens HOX-2.7 protein (66 AA)
protein.
Length = 66
Score = 32.7 bits (71), Expect = 0.87
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYI 537
R Y+ Q +ELEKEFH++RY+
Sbjct: 5 RTAYTSAQLVELEKEFHFNRYL 26
>X16172-1|CAA34294.1| 78|Homo sapiens HOX-2.5 protein (78 AA)
protein.
Length = 78
Score = 32.3 bits (70), Expect = 1.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 11 RSSRKKRCPYTKYQTLELEKEFLFNMYLT 39
>AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein.
Length = 290
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 418 PNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
P + Q PG+ R R YS Q LELEKEF ++ Y+T +R
Sbjct: 187 PWMRPQAAPGRRRG----RQTYSRFQTLELEKEFLFNPYLTRKR 226
>X59372-1|CAA42016.1| 342|Homo sapiens homeobox protein protein.
Length = 342
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 273 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 301
>X16173-1|CAA34295.1| 70|Homo sapiens HOX-2.4 protein (70 AA)
protein.
Length = 70
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LELEKEF ++ Y+T +R
Sbjct: 9 RQTYSRYQTLELEKEFLFNPYLTRKR 34
>X15506-1|CAA33528.1| 79|Homo sapiens Hox5.2 gene product (79 AA)
protein.
Length = 79
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 10 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 38
>L11239-1|AAA36002.1| 139|Homo sapiens homeobox protein protein.
Length = 139
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITI 543
GK+R + R ++ Q LELEKEFH +Y+++
Sbjct: 35 GKSRRR---RTAFTSEQLLELEKEFHCKKYLSL 64
>BC053898-1|AAH53898.1| 242|Homo sapiens homeobox C8 protein.
Length = 242
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LELEKEF ++ Y+T +R
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKR 178
>BC053894-1|AAH53894.1| 260|Homo sapiens homeobox C9 protein.
Length = 260
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 190 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 218
>BC044855-1|AAH44855.2| 342|Homo sapiens homeobox D9 protein.
Length = 342
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 273 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 301
>BC032769-1|AAH32769.1| 263|Homo sapiens HOXC9 protein protein.
Length = 263
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 193 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 221
>AY014302-1|AAG42151.1| 260|Homo sapiens HOXC9 protein.
Length = 260
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
R+ K R Y+ +Q LELEKEF ++ Y+T
Sbjct: 190 RSTRKKRCPYTKYQTLELEKEFLFNMYLT 218
>AY014300-1|AAG42146.1| 242|Homo sapiens HOXC8 protein.
Length = 242
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LELEKEF ++ Y+T +R
Sbjct: 153 RQTYSRYQTLELEKEFLFNPYLTRKR 178
>AY014294-1|AAG42143.1| 243|Homo sapiens HOXB8 protein.
Length = 243
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LELEKEF ++ Y+T +R
Sbjct: 150 RQTYSRYQTLELEKEFLFNPYLTRKR 175
>AK096222-1|BAC04730.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ38903 fis, clone NT2NE2001252, highly similar to
HOMEOBOX PROTEIN HOX-B8. ).
Length = 243
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LELEKEF ++ Y+T +R
Sbjct: 150 RQTYSRYQTLELEKEFLFNPYLTRKR 175
>U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein.
Length = 347
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITI 543
GK R + R ++ Q LELEKEFH +Y+++
Sbjct: 244 GKNRRR---RTAFTSEQLLELEKEFHCKKYLSL 273
>U02080-1|AAA17406.1| 133|Homo sapiens homeobox protein protein.
Length = 133
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITI 543
GK R + R ++ Q LELEKEFH +Y+++
Sbjct: 30 GKNRRR---RTAFTSEQLLELEKEFHCKKYLSL 59
>AF118452-1|AAD39907.1| 348|Homo sapiens homeobox protein GBX2
protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITI 543
GK R + R ++ Q LELEKEFH +Y+++
Sbjct: 245 GKNRRR---RTAFTSEQLLELEKEFHCKKYLSL 274
>AC079135-1|AAX93240.1| 348|Homo sapiens unknown protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 445 GKTRTKDKYRVVYSDHQRLELEKEFHYSRYITI 543
GK R + R ++ Q LELEKEFH +Y+++
Sbjct: 245 GKNRRR---RTAFTSEQLLELEKEFHCKKYLSL 274
>X60299-1|CAA42841.1| 680|Homo sapiens KALIG-1 protein.
Length = 680
Score = 31.1 bits (67), Expect = 2.7
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -1
Query: 418 VFSSTRMATAAGPVVVKAEILSLENLLLDSPNPPWPATAYRLSLVLLVPFSENDADPESI 239
V + +R + ++ +++IL ++ +L PN P+T YRL + +L P E P +I
Sbjct: 592 VTTESRQNSLPNSIISQSQILPSDHYVLTVPNLR-PSTLYRLEVQVLTPGGEG---PATI 647
Query: 238 PP*PVRRSMRTTVALPSSDAASRTSHR 158
++ RT PSS S HR
Sbjct: 648 ------KTFRTPELPPSSAHRSHLKHR 668
>U37431-1|AAC50249.1| 330|Homo sapiens HOXA1 protein.
Length = 330
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY---------RVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK + NP KT +Y R ++ Q ELEKEFH+++Y+T R
Sbjct: 200 FDWMK-----VKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRAR 253
>U10421-1|AAA86954.1| 335|Homo sapiens HOX A1 homeodomain protein
protein.
Length = 335
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY---------RVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK + NP KT +Y R ++ Q ELEKEFH+++Y+T R
Sbjct: 205 FDWMK-----VKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRAR 258
>S79910-1|AAB35423.2| 330|Homo sapiens HOXA1 protein.
Length = 330
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY---------RVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK + NP KT +Y R ++ Q ELEKEFH+++Y+T R
Sbjct: 200 FDWMK-----VKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRAR 253
>S60085-1|AAB20108.1| 679|Homo sapiens ADMLX protein.
Length = 679
Score = 31.1 bits (67), Expect = 2.7
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -1
Query: 418 VFSSTRMATAAGPVVVKAEILSLENLLLDSPNPPWPATAYRLSLVLLVPFSENDADPESI 239
V + +R + ++ +++IL ++ +L PN P+T YRL + +L P E P +I
Sbjct: 591 VTTESRQNSLPNSIISQSQILPSDHYVLTVPNLR-PSTLYRLEVQVLTPGGEG---PATI 646
Query: 238 PP*PVRRSMRTTVALPSSDAASRTSHR 158
++ RT PSS S HR
Sbjct: 647 ------KTFRTPELPPSSAHRSHLKHR 667
>M97252-1|AAA59202.1| 680|Homo sapiens KAL protein.
Length = 680
Score = 31.1 bits (67), Expect = 2.7
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -1
Query: 418 VFSSTRMATAAGPVVVKAEILSLENLLLDSPNPPWPATAYRLSLVLLVPFSENDADPESI 239
V + +R + ++ +++IL ++ +L PN P+T YRL + +L P E P +I
Sbjct: 592 VTTESRQNSLPNSIISQSQILPSDHYVLTVPNLR-PSTLYRLEVQVLTPGGEG---PATI 647
Query: 238 PP*PVRRSMRTTVALPSSDAASRTSHR 158
++ RT PSS S HR
Sbjct: 648 ------KTFRTPELPPSSAHRSHLKHR 668
>BC032547-1|AAH32547.1| 335|Homo sapiens homeobox A1 protein.
Length = 335
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY---------RVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK + NP KT +Y R ++ Q ELEKEFH+++Y+T R
Sbjct: 205 FDWMK-----VKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRAR 258
>AC004079-1|AAS00374.1| 335|Homo sapiens unknown protein.
Length = 335
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Frame = +1
Query: 400 YEWMKKPNYQTQPNPGKTRTKDKY---------RVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK + NP KT +Y R ++ Q ELEKEFH+++Y+T R
Sbjct: 205 FDWMK-----VKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRAR 258
>Z83853-1|CAI18752.1| 245|Homo sapiens protein ( Human DNA sequence
from clone SC22CB-109E1 on chromosome 22q12.3. ).
Length = 245
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 409 MKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRY 534
++KP + QP G+ ++K + R ++ Q ELEK FH++ Y
Sbjct: 67 LEKPP-KDQPQEGR-KSKRRVRTTFTTEQLHELEKIFHFTHY 106
>X99681-1|CAA67997.1| 49|Homo sapiens HOXC8 protein.
Length = 49
Score = 30.7 bits (66), Expect = 3.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS +Q LEL+KEF ++ Y+T +R
Sbjct: 7 RQTYSRYQTLELQKEFLFNPYLTRKR 32
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 YEWMK----KPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRR 549
++WMK P PG + R ++ Q ELEKEFH+++Y++ R
Sbjct: 180 FDWMKVKRNPPKTAKVSEPG-LGSPSGLRTNFTTRQLTELEKEFHFNKYLSRAR 232
>X15507-1|CAA33529.1| 95|Homo sapiens Hox5.4 gene product (AA
1-95) protein.
Length = 95
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS Q LELEKEF ++ Y+T +R
Sbjct: 9 RQTYSRFQTLELEKEFLFNPYLTRKR 34
>BC113633-1|AAI13634.1| 245|Homo sapiens intestine-specific
homeobox protein.
Length = 245
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 409 MKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRY 534
++KP + QP G+ ++K + R ++ Q ELEK FH++ Y
Sbjct: 67 LEKPP-KDQPQEGR-KSKRRVRTTFTTEQLHELEKIFHFTHY 106
>BC112212-1|AAI12213.1| 245|Homo sapiens intestine-specific
homeobox protein.
Length = 245
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 409 MKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRY 534
++KP + QP G+ ++K + R ++ Q ELEK FH++ Y
Sbjct: 67 LEKPP-KDQPQEGR-KSKRRVRTTFTTEQLHELEKIFHFTHY 106
>BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein.
Length = 289
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS Q LELEKEF ++ Y+T +R
Sbjct: 200 RQTYSRFQTLELEKEFLFNPYLTRKR 225
>BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein.
Length = 289
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 472 RVVYSDHQRLELEKEFHYSRYITIRR 549
R YS Q LELEKEF ++ Y+T +R
Sbjct: 200 RQTYSRFQTLELEKEFLFNPYLTRKR 225
>BC001543-1|AAH01543.1| 304|Homo sapiens homeobox C11 protein.
Length = 304
Score = 30.7 bits (66), Expect = 3.5
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 412 KKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
K+P PN +TR K R YS Q ELE+EF ++ YI
Sbjct: 219 KEPAKGAAPNAPRTRKK---RCPYSKFQIRELEREFFFNVYI 257
>AL024494-1|CAI19818.1| 245|Homo sapiens protein ( Human DNA
sequence from clone RP1-215F16 on chromosome
22q12.1-12.3.Contains a capping protein (actin filament)
muscle Z-line, alpha 2 ).
Length = 245
Score = 30.7 bits (66), Expect = 3.5
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 409 MKKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRY 534
++KP + QP G+ ++K + R ++ Q ELEK FH++ Y
Sbjct: 67 LEKPP-KDQPQEGR-KSKRRVRTTFTTEQLHELEKIFHFTHY 106
>AJ000041-1|CAA03876.1| 304|Homo sapiens Hox protein protein.
Length = 304
Score = 30.7 bits (66), Expect = 3.5
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 412 KKPNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYI 537
K+P PN +TR K R YS Q ELE+EF ++ YI
Sbjct: 219 KEPAKGAAPNAPRTRKK---RCPYSKFQIRELEREFFFNVYI 257
>BC041090-1|AAH41090.1| 239|Homo sapiens NK2 homeobox 8 protein.
Length = 239
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 439 NPGKTRTK-DKYRVVYSDHQRLELEKEFHYSRYIT 540
+PG K K RV++S Q LELE+ F RY++
Sbjct: 76 SPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLS 110
>AF000297-1|AAC71082.1| 239|Homo sapiens nk-2-related transcription
factor protein.
Length = 239
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 439 NPGKTRTK-DKYRVVYSDHQRLELEKEFHYSRYIT 540
+PG K K RV++S Q LELE+ F RY++
Sbjct: 76 SPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLS 110
>AF000295-1|AAC71081.1| 239|Homo sapiens nk-2-related transcription
factor protein.
Length = 239
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 439 NPGKTRTK-DKYRVVYSDHQRLELEKEFHYSRYIT 540
+PG K K RV++S Q LELE+ F RY++
Sbjct: 76 SPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLS 110
>X90828-1|CAA62342.1| 280|Homo sapiens Lbx1 transcription factor
protein.
Length = 280
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+ + K R +++HQ ELEK F Y +Y++
Sbjct: 122 KKRRKSRTAFTNHQIYELEKRFLYQKYLS 150
>BT009908-1|AAP88910.1| 330|Homo sapiens homeo box C13 protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>BC090850-1|AAH90850.1| 330|Homo sapiens homeobox C13 protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>BC069156-1|AAH69156.1| 281|Homo sapiens ladybird homeobox 1
protein.
Length = 281
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+ + K R +++HQ ELEK F Y +Y++
Sbjct: 123 KKRRKSRTAFTNHQIYELEKRFLYQKYLS 151
>BC025788-1|AAH25788.1| 293|Homo sapiens NK2 transcription factor
related, locus 3 (Drosophila) protein.
Length = 293
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 448 KTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
K R++ K RV++S Q ELE+ F RY++
Sbjct: 144 KPRSRRKPRVLFSQAQVFELERRFKQQRYLS 174
>BC002754-1|AAH02754.1| 330|Homo sapiens HOXC13 protein protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>AL353719-1|CAI16899.1| 364|Homo sapiens NK2 transcription factor
related, locus 3 (Drosophila) protein.
Length = 364
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 448 KTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
K R++ K RV++S Q ELE+ F RY++
Sbjct: 144 KPRSRRKPRVLFSQAQVFELERRFKQQRYLS 174
>AL135794-1|CAH72508.2| 281|Homo sapiens Ladybird homeobox homolog
1 (Drosophila) protein.
Length = 281
Score = 29.9 bits (64), Expect = 6.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 454 RTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+ + K R +++HQ ELEK F Y +Y++
Sbjct: 123 KKRRKSRTAFTNHQIYELEKRFLYQKYLS 151
>AK024027-1|BAB14786.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ13965 fis, clone Y79AA1001391, moderately
similar to HOMEOBOX PROTEIN HOX-A13. ).
Length = 146
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 67 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 102
>AJ438986-1|CAD27941.1| 330|Homo sapiens hypothetical protein
protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>AF263466-1|AAF73439.1| 330|Homo sapiens HOXC13 protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>AF255676-1|AAF67760.1| 330|Homo sapiens homeoprotein C13 protein.
Length = 330
Score = 29.9 bits (64), Expect = 6.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 433 QPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
QP R K RV Y+ Q ELEKE+ S++IT
Sbjct: 251 QPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFIT 286
>AF229631-1|AAF44651.1| 211|Homo sapiens homeobox protein NKX2-3
protein.
Length = 211
Score = 29.9 bits (64), Expect = 6.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 448 KTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
K R++ K RV++S Q ELE+ F RY++
Sbjct: 144 KPRSRRKPRVLFSQAQVFELERRFKQQRYLS 174
>BC075093-1|AAH75093.1| 273|Homo sapiens NK2 homeobox 2 protein.
Length = 273
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+T G K K RV++S Q ELE+ F RY++
Sbjct: 117 ETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLS 154
>BC075092-1|AAH75092.1| 273|Homo sapiens NK2 homeobox 2 protein.
Length = 273
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+T G K K RV++S Q ELE+ F RY++
Sbjct: 117 ETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLS 154
>BA000025-63|BAB63315.1| 136|Homo sapiens SPR1 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AL773544-4|CAI18481.1| 136|Homo sapiens psoriasis susceptibility 1
candidate 2 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AL662867-4|CAI17721.1| 136|Homo sapiens psoriasis susceptibility 1
candidate 2 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AL662844-4|CAI18325.1| 136|Homo sapiens psoriasis susceptibility 1
candidate 2 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWLPEP---PRTDPPQPPRPDDPWPA 103
>AL133325-3|CAC00770.1| 273|Homo sapiens NK2 transcription factor
related, locus 2 (Drosophila) protein.
Length = 273
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+T G K K RV++S Q ELE+ F RY++
Sbjct: 117 ETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLS 154
>AF484420-1|AAO49377.1| 136|Homo sapiens psoriasis susceptibility 1
candidate 2 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AF019415-1|AAC83132.1| 273|Homo sapiens homeodomain protein
protein.
Length = 273
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 427 QTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHYSRYIT 540
+T G K K RV++S Q ELE+ F RY++
Sbjct: 117 ETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLS 154
>AB202103-4|BAE78627.1| 136|Homo sapiens chromosome 6 open reading
frame 17 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AB103620-3|BAF31284.1| 136|Homo sapiens hypothetical protein
protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AB088114-3|BAC54949.1| 136|Homo sapiens hypothetical protein
protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
>AB031480-1|BAA88131.1| 136|Homo sapiens SPR1 protein.
Length = 136
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 214 WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 315
W P TG W P+P P+ +P + D P PA
Sbjct: 73 WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,475,102
Number of Sequences: 237096
Number of extensions: 1639426
Number of successful extensions: 6011
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 5717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6000
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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