Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27m24
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119133-1|AAM50993.1|  178|Drosophila melanogaster RE35766p pro...   124   1e-28
AE014297-3081|AAF55944.2|  178|Drosophila melanogaster CG13410-P...   124   1e-28
BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    28   6.7  
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    28   6.7  
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    28   6.7  

>AY119133-1|AAM50993.1|  178|Drosophila melanogaster RE35766p
           protein.
          Length = 178

 Score =  124 bits (298), Expect = 1e-28
 Identities = 66/107 (61%), Positives = 80/107 (74%), Gaps = 6/107 (5%)
 Frame = +3

Query: 222 LLPQNSLL--ANKQILDI--LMKIDFTP--TRSVIKFSLKKGKRKTVKAVIKRFFRLHWG 383
           LLP  SL   A+ Q+L +  ++    TP  TR+V KFSL KGKRKTVKAV+KRF RL WG
Sbjct: 43  LLPTPSLASPAHHQLLQLPGVLAATGTPSNTRNVTKFSLVKGKRKTVKAVLKRFKRLDWG 102

Query: 384 GWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWK 524
            WIRT  GR KKL+KKS+A +RRL+QHVF N+TQ+ LLDKMVT YW+
Sbjct: 103 AWIRTHSGRQKKLFKKSAALRRRLKQHVFTNATQSWLLDKMVTSYWR 149


>AE014297-3081|AAF55944.2|  178|Drosophila melanogaster CG13410-PA
           protein.
          Length = 178

 Score =  124 bits (298), Expect = 1e-28
 Identities = 66/107 (61%), Positives = 80/107 (74%), Gaps = 6/107 (5%)
 Frame = +3

Query: 222 LLPQNSLL--ANKQILDI--LMKIDFTP--TRSVIKFSLKKGKRKTVKAVIKRFFRLHWG 383
           LLP  SL   A+ Q+L +  ++    TP  TR+V KFSL KGKRKTVKAV+KRF RL WG
Sbjct: 43  LLPTPSLASPAHHQLLQLPGVLAATGTPSNTRNVTKFSLVKGKRKTVKAVLKRFKRLDWG 102

Query: 384 GWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWK 524
            WIRT  GR KKL+KKS+A +RRL+QHVF N+TQ+ LLDKMVT YW+
Sbjct: 103 AWIRTHSGRQKKLFKKSAALRRRLKQHVFTNATQSWLLDKMVTSYWR 149


>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 267 ILMKIDFTPTRSVIKFSLKKGK 332
           ILMK+D  P  +V + ++KKGK
Sbjct: 198 ILMKLDLKPMENVARVTMKKGK 219


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 267 ILMKIDFTPTRSVIKFSLKKGK 332
           ILMK+D  P  +V + ++KKGK
Sbjct: 191 ILMKLDLKPMENVARVTMKKGK 212


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 267 ILMKIDFTPTRSVIKFSLKKGK 332
           ILMK+D  P  +V + ++KKGK
Sbjct: 198 ILMKLDLKPMENVARVTMKKGK 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,677,349
Number of Sequences: 53049
Number of extensions: 447042
Number of successful extensions: 1283
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)