Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27m15
(191 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 113 1e-25
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 113 1e-25
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 113 1e-25
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 113 1e-25
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 113 1e-25
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 113 1e-25
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 113 1e-25
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 95 4e-20
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 64 1e-10
BT007049-1|AAP35698.1| 286|Homo sapiens ceroid-lipofuscinosis, ... 28 6.1
BC007725-1|AAH07725.1| 286|Homo sapiens ceroid-lipofuscinosis, ... 28 6.1
AF123761-1|AAF13119.1| 286|Homo sapiens putative transmembrane ... 28 6.1
AF123760-1|AAF13118.1| 286|Homo sapiens putative transmembrane ... 28 6.1
AF123759-1|AAF13117.1| 286|Homo sapiens putative transmembrane ... 28 6.1
AF123758-1|AAF13116.1| 286|Homo sapiens putative transmembrane ... 28 6.1
AF123757-1|AAF13115.1| 286|Homo sapiens putative transmembrane ... 28 6.1
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 185 VA 190
VA
Sbjct: 204 VA 205
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 113 bits (271), Expect = 1e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 184
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 151 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 210
Query: 185 VA 190
VA
Sbjct: 211 VA 212
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +2
Query: 32 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 190
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 53
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2
Query: 5 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 100
CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 94 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
>BT007049-1|AAP35698.1| 286|Homo sapiens ceroid-lipofuscinosis,
neuronal 8 (epilepsy, progressive with mental retardatio
protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>BC007725-1|AAH07725.1| 286|Homo sapiens ceroid-lipofuscinosis,
neuronal 8 (epilepsy, progressive with mental retardatio
protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>AF123761-1|AAF13119.1| 286|Homo sapiens putative transmembrane
protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>AF123760-1|AAF13118.1| 286|Homo sapiens putative transmembrane
protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>AF123759-1|AAF13117.1| 286|Homo sapiens putative transmembrane
protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>AF123758-1|AAF13116.1| 286|Homo sapiens putative transmembrane
protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
>AF123757-1|AAF13115.1| 286|Homo sapiens putative transmembrane
protein protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 7 LFGCRLS-THHYWCSCLWSYEG 69
+F CR+ T+H W C W ++G
Sbjct: 200 MFHCRMVLTYHMWWVCFWHWDG 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,651,590
Number of Sequences: 237096
Number of extensions: 483656
Number of successful extensions: 1021
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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