Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27m14
(730 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069733-1|AAL39878.1| 541|Drosophila melanogaster LP05116p pro... 267 9e-72
AE014296-2793|AAF49418.2| 541|Drosophila melanogaster CG9701-PA... 267 9e-72
Y08035-1|CAA69291.1| 1250|Drosophila melanogaster retinal degene... 33 0.53
X57978-1|CAA41044.1| 1054|Drosophila melanogaster retinal degene... 33 0.53
AY051422-1|AAK92846.1| 1259|Drosophila melanogaster GH09970p pro... 33 0.53
AE014298-1961|AAF48315.1| 1250|Drosophila melanogaster CG11111-P... 33 0.53
AE014298-1960|AAX52495.1| 1259|Drosophila melanogaster CG11111-P... 33 0.53
AE014298-1959|AAX52494.1| 1259|Drosophila melanogaster CG11111-P... 33 0.53
AE014298-1958|AAF48316.2| 1259|Drosophila melanogaster CG11111-P... 33 0.53
AY071008-1|AAL48630.1| 814|Drosophila melanogaster RE09129p pro... 29 8.6
AE014134-2208|AAF53197.2| 814|Drosophila melanogaster CG6417-PA... 29 8.6
>AY069733-1|AAL39878.1| 541|Drosophila melanogaster LP05116p
protein.
Length = 541
Score = 267 bits (655), Expect = 9e-72
Identities = 115/216 (53%), Positives = 150/216 (69%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP F +G S+SYQ+EG WN DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26 FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
++M EL + YRFSLSWPR+MP G+ N +S G KYY+NLID LL I P+VTI+HW+
Sbjct: 86 VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145
Query: 440 LPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPP 619
LPQ LQ+LGGW NP I+ F+DYAR+V ++ DRVK W ++NEP +C++ Y MAP
Sbjct: 146 LPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHGYGVDYMAPS 205
Query: 620 IFEPHVAPYVCTKHVLLAHAKAWRIYDEEFRPMYNG 727
P + Y+C ++L AHA+ +Y E F+P G
Sbjct: 206 YNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241
>AE014296-2793|AAF49418.2| 541|Drosophila melanogaster CG9701-PA
protein.
Length = 541
Score = 267 bits (655), Expect = 9e-72
Identities = 115/216 (53%), Positives = 150/216 (69%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP F +G S+SYQ+EG WN DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26 FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
++M EL + YRFSLSWPR+MP G+ N +S G KYY+NLID LL I P+VTI+HW+
Sbjct: 86 VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145
Query: 440 LPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPP 619
LPQ LQ+LGGW NP I+ F+DYAR+V ++ DRVK W ++NEP +C++ Y MAP
Sbjct: 146 LPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHGYGVDYMAPS 205
Query: 620 IFEPHVAPYVCTKHVLLAHAKAWRIYDEEFRPMYNG 727
P + Y+C ++L AHA+ +Y E F+P G
Sbjct: 206 YNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241
>Y08035-1|CAA69291.1| 1250|Drosophila melanogaster retinal
degeneration B protein protein.
Length = 1250
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>X57978-1|CAA41044.1| 1054|Drosophila melanogaster retinal
degeneration B protein protein.
Length = 1054
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AY051422-1|AAK92846.1| 1259|Drosophila melanogaster GH09970p
protein.
Length = 1259
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AE014298-1961|AAF48315.1| 1250|Drosophila melanogaster CG11111-PB,
isoform B protein.
Length = 1250
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AE014298-1960|AAX52495.1| 1259|Drosophila melanogaster CG11111-PD,
isoform D protein.
Length = 1259
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AE014298-1959|AAX52494.1| 1259|Drosophila melanogaster CG11111-PC,
isoform C protein.
Length = 1259
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AE014298-1958|AAF48316.2| 1259|Drosophila melanogaster CG11111-PA,
isoform A protein.
Length = 1259
Score = 32.7 bits (71), Expect = 0.53
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 479 PLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAPPIFEPHVAPYVCTK 658
PL DW E+Y R V + +S+ IC + GM + E + K
Sbjct: 171 PLAEDWLEEYWREVKGKKQPTPRN-MSLMTAYKICRVEFRYWGMQTKL-EKFIHDVALRK 228
Query: 659 HVLLAHAKAWRIYDEEF 709
+L AH +AW DE F
Sbjct: 229 MMLRAHRQAWAWQDEWF 245
>AY071008-1|AAL48630.1| 814|Drosophila melanogaster RE09129p
protein.
Length = 814
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 467 GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPV 574
GW NPLIVDW + + ++FA W + P+
Sbjct: 79 GW-NPLIVDWLLVASGLFQAVFALAFAYWADVYHPI 113
>AE014134-2208|AAF53197.2| 814|Drosophila melanogaster CG6417-PA
protein.
Length = 814
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 467 GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPV 574
GW NPLIVDW + + ++FA W + P+
Sbjct: 79 GW-NPLIVDWLLVASGLFQAVFALAFAYWADVYHPI 113
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,196,829
Number of Sequences: 53049
Number of extensions: 783531
Number of successful extensions: 1784
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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