Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27m14
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 161 4e-40
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p... 29 3.4
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein. 29 3.4
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ... 29 3.4
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 29 4.5
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 28 5.9
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 28 5.9
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 161 bits (392), Expect = 4e-40
Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 8/224 (3%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP FK A+A+YQ+EGA +++ +G S WD + +P I+D ++ D++CD ++ D
Sbjct: 7 FPKNFKLATATAAYQIEGAKDLNGRGFSTWDA-IRLEPGRILDNSDPDLSCDGLLKYKED 65
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
+ + E+G+ YRFS+SW R++P G + I+E+G K+Y +L L + IEP+VT+FH+D
Sbjct: 66 VALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHFD 125
Query: 440 LPQSLQDLG-GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE-PVSICDYVYNTGG-- 607
+P ++ D G W+N + FE +A + F F D VKTW++ NE + G
Sbjct: 126 MPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYNEINCQAWGSIVKVEGEF 185
Query: 608 -MAP--PIFEPH-VAPYVCTKHVLLAHAKAWRIYDEEFRPMYNG 727
+ P P E H APY ++LL HAK +R YD+ ++P +G
Sbjct: 186 WLCPERPEIENHKQAPYFGAANMLLTHAKIYRNYDQNYKPTQHG 229
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 159 bits (387), Expect = 1e-39
Identities = 82/224 (36%), Positives = 132/224 (58%), Gaps = 8/224 (3%)
Frame = +2
Query: 80 FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
FP F+ A+A+YQ+EGA N+ +G S WD + ++ I D ++ D++C+ ++ D
Sbjct: 7 FPKNFQLATATAAYQIEGAKNLDGRGFSTWDS-IRSENGRIHDNSDPDLSCEGRLKYKED 65
Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
+ + +++G+ YRFS+SW R++P G I+EDG ++Y ++ L D GIEP+VT+FH+D
Sbjct: 66 VALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHFD 125
Query: 440 LPQSLQDLG-GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE-PVSICDYVYNTGG-- 607
+P S+ D G W+N + FE +A + F F D VKTW++ NE + V G
Sbjct: 126 MPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFNEINMQAWSSVVKIEGEL 185
Query: 608 -MAP--PIFEPH-VAPYVCTKHVLLAHAKAWRIYDEEFRPMYNG 727
+ P P E H APY+ ++LL HAK +R Y + ++ NG
Sbjct: 186 WLCPDRPEIENHEQAPYIAATNMLLTHAKIYRNYQKNYKETQNG 229
>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 549 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 598
>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
Length = 1167
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 570 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 619
>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 628 LENRRSHSASVINIVANRYRLVYRDPGFNSIRE-QREHDPSVVLKPVDYQR 479
L RS +NI+ + Y RDPG+ ++ ++H+ +VL+ D QR
Sbjct: 549 LVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE-DEQR 598
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = -1
Query: 706 FLVINPPSFGVSQQNMLSTHIRGHVRLEN--RRSHSASVINIVANRYRLVYRDPGFNSIR 533
F+ P F V+ QN+ S+ + + N R+ +N R R+VY N +
Sbjct: 206 FITSQPNIFSVTGQNIKSSPSKNAGQTPNGKRQVPPMLTVNGKTRRGRIVYSTQELNILE 265
Query: 532 EQREHDPSVVLKP 494
+ E DP+ P
Sbjct: 266 KYYEEDPNACADP 278
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 646 IRGHVRLENRRSHSASVINIVANRYRLVYRDPGFNSIREQREHDPSVVLKPVDYQRIHPA 467
+R +R + A ++ + + RDPG I EQ +DP V + + I
Sbjct: 248 VRNCLRSNDEDPEKAKERSLADPEVQEILRDPGMRMILEQMSNDPGAVREHLKNPEIFQK 307
Query: 466 TKILQTLG*IPMK 428
L+ G I M+
Sbjct: 308 LMKLRDAGVIQMR 320
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 398 DKGIEPLVTIFHWDLPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE 568
++GI P F + + L+ LG W + + E Y V + L +DR + +N+
Sbjct: 345 EEGIIPRAAAFLFAESRKLESLG-WKFDFSLSFLEVYNNVAYDLLSDRAVVQLRLND 400
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 398 DKGIEPLVTIFHWDLPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINE 568
++GI P F + + L+ LG W + + E Y V + L +DR + +N+
Sbjct: 345 EEGIIPRAAAFLFAESRKLESLG-WKFDFSLSFLEVYNNVAYDLLSDRAVVQLRLND 400
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,251
Number of Sequences: 27780
Number of extensions: 386021
Number of successful extensions: 974
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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