Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27l05
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   1.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   1.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   1.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   1.8  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.5  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 224 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 331
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 224 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 331
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 224 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 331
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 224 EMEKTPNLVI-VSPNVKYSDDFIYADYEYNETLVKKI 331
           E  K P ++  +S N KYS+   Y +  YN    KK+
Sbjct: 74  ERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 500 GSLDANWFGSITQASTVRLGLDEXGNDVNV 589
           G +D    G  T+A+ +RLGL E    VN+
Sbjct: 214 GFIDGLGLGDNTKAAVMRLGLMEIIKFVNI 243


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 492 VFQDNWCRLAKTAAVNVEPLLPPHP 418
           +F+ NW  L     ++VE +   HP
Sbjct: 150 IFRQNWASLQPYKKLSVEVVRREHP 174


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -2

Query: 337 IVDFFH*CFVILVIGVNKIIRIFHIRTDYNQIWCFF 230
           I D F  C V+   GVN ++  +     +   W  F
Sbjct: 69  IADLFVGCLVMTFAGVNDLLGYWVFGPRFCDTWIAF 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,808
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)