Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k18
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U45955-1|AAB16888.1| 283|Homo sapiens M6b protein. 31 5.4
BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein. 31 5.4
BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein. 31 5.4
AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein. 31 5.4
AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane glyco... 31 5.4
AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane glyco... 31 5.4
AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein. 31 5.4
L76687-1|AAC15861.1| 540|Homo sapiens Grb14 protein. 30 7.2
BC110517-1|AAI10518.1| 320|Homo sapiens ZDHHC20 protein protein. 30 9.5
BC053559-1|AAH53559.1| 540|Homo sapiens growth factor receptor-... 30 9.5
BC050367-1|AAH50367.2| 354|Homo sapiens zinc finger, DHHC-type ... 30 9.5
AL136219-3|CAH70596.1| 365|Homo sapiens protein ( Human DNA seq... 30 9.5
AC107075-1|AAY14768.1| 368|Homo sapiens unknown protein. 30 9.5
>U45955-1|AAB16888.1| 283|Homo sapiens M6b protein.
Length = 283
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 230 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 280
>BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein.
Length = 305
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 252 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 302
>BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 212 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 262
>AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 212 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 262
>AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 283
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 230 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 280
>AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 212 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 262
>AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein.
Length = 265
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -3
Query: 344 VCNLLSNKFYMKYHQILFLYRCYLNIG*TVPCLTFLKFFLNVYNEAF*TTTSGQPCC 174
+CN +N+FYM YH LF+ C G TV L + YN A S + CC
Sbjct: 212 ICN--TNEFYMSYH--LFIVAC-AGAGATVIAL-LIYMMATTYNYAVLKFKSREDCC 262
>L76687-1|AAC15861.1| 540|Homo sapiens Grb14 protein.
Length = 540
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 404 SISDPYPKYLCQPCYSLLQGAMLFRKNAQRSDEILKHPIEDNS 532
SI +P+P+ C P S+L A LF K R +++K ED +
Sbjct: 77 SIPNPFPELCCSPITSVL-SADLFPKANSRKKQVIKVYSEDET 118
>BC110517-1|AAI10518.1| 320|Homo sapiens ZDHHC20 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 9.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -1
Query: 643 VIFWLFVLLLCNFEYXXXXXXXIKAWIGQIIVMNSVF*I--IFYGMFKYLIGTLSIFSE* 470
++F L+ LL C F IK W ++ + F + +F+ + I LS+FS
Sbjct: 172 LLFLLYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSY- 230
Query: 469 HCTLEQRVARLAQIFRVRVADTYKY 395
HC L + + FR A T+ Y
Sbjct: 231 HCWLVGKNRTTIESFR---APTFSY 252
>BC053559-1|AAH53559.1| 540|Homo sapiens growth factor
receptor-bound protein 14 protein.
Length = 540
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 404 SISDPYPKYLCQPCYSLLQGAMLFRKNAQRSDEILKHPIEDNS 532
SI +P+P+ C P S+L A LF K R +++K ED +
Sbjct: 77 SIPNPFPELCCSPFTSVL-SADLFPKANSRKKQVIKVYSEDET 118
>BC050367-1|AAH50367.2| 354|Homo sapiens zinc finger, DHHC-type
containing 20 protein.
Length = 354
Score = 29.9 bits (64), Expect = 9.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -1
Query: 643 VIFWLFVLLLCNFEYXXXXXXXIKAWIGQIIVMNSVF*I--IFYGMFKYLIGTLSIFSE* 470
++F L+ LL C F IK W ++ + F + +F+ + I LS+FS
Sbjct: 172 LLFLLYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSY- 230
Query: 469 HCTLEQRVARLAQIFRVRVADTYKY 395
HC L + + FR A T+ Y
Sbjct: 231 HCWLVGKNRTTIESFR---APTFSY 252
>AL136219-3|CAH70596.1| 365|Homo sapiens protein ( Human DNA
sequence from clone RP11-149B7 on chromosome 13 Contains
aglyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH)
pseudogene, 2rase (TD).
Length = 365
Score = 29.9 bits (64), Expect = 9.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -1
Query: 643 VIFWLFVLLLCNFEYXXXXXXXIKAWIGQIIVMNSVF*I--IFYGMFKYLIGTLSIFSE* 470
++F L+ LL C F IK W ++ + F + +F+ + I LS+FS
Sbjct: 172 LLFLLYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFISVLSLFSY- 230
Query: 469 HCTLEQRVARLAQIFRVRVADTYKY 395
HC L + + FR A T+ Y
Sbjct: 231 HCWLVGKNRTTIESFR---APTFSY 252
>AC107075-1|AAY14768.1| 368|Homo sapiens unknown protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 404 SISDPYPKYLCQPCYSLLQGAMLFRKNAQRSDEILKHPIEDNS 532
SI +P+P+ C P S+L A LF K R +++K ED +
Sbjct: 77 SIPNPFPELCCSPFTSVL-SADLFPKANSRKKQVIKVYSEDET 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,215,730
Number of Sequences: 237096
Number of extensions: 1776946
Number of successful extensions: 6803
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6803
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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