Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k09
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 32 2.2
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 32 2.2
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 32 2.2
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 31 3.8
BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein pr... 31 5.0
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 31 5.0
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 30 6.6
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 30 8.7
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 30 8.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 30 8.7
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +2
Query: 440 SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 610
S TP T P K SP + P T+ + S P+T +T +T T +S P
Sbjct: 2887 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 2944
Query: 611 LTPSNTTGTLSPPCTKATSCSSS 679
+ TTGTL T + S+
Sbjct: 2945 SSTLGTTGTLPEQTTTPVATMST 2967
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 494 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 649
C T +S + P T T +T + T ++T + PS+T GT PP
Sbjct: 1618 CPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPP 1669
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 494 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 649
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 2845 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 2896
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +2
Query: 440 SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 610
S TP T P K SP + P T+ + S P+T +T +T T +S P
Sbjct: 101 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTTTATKSTATSVTPIP 158
Query: 611 LTPSNTTGTLSPPCTKATSCSSS 679
+ TTGTL T + S+
Sbjct: 159 SSTLGTTGTLPEQTTTPVATMST 181
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 494 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 649
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 59 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 110
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +2
Query: 440 SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 610
S TP T P K SP + P T+ + S P+T +T +T T +S P
Sbjct: 361 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 418
Query: 611 LTPSNTTGTLSPPCTKATSCSSS 679
+ TTGTL T + S+
Sbjct: 419 SSTLGTTGTLPEQTTTPVATMST 441
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 494 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 649
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 319 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 370
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 31.1 bits (67), Expect = 3.8
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 446 TPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLT 616
TP T P K SP + P T+ + S P+T +T +T T +S P +
Sbjct: 54 TPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSS 111
Query: 617 PSNTTGTLSPPCTKATSCSSS 679
TTGTL T + S+
Sbjct: 112 TLGTTGTLPEQTTTPVATMST 132
>BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 198 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 377
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 45 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101
Query: 378 KQKGPS-RPQVDRPTKPQQN 434
K G S +PQ + + +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 198 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 377
SE + G QGSR SD+ + L +P N Q + H V SD+ +DCQ
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177
Query: 378 KQKGPS-RPQVDRPTKPQQN 434
K G S +PQ + + +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 30.3 bits (65), Expect = 6.6
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 440 SVTPKTKPARKSPGSLPPCWKTT----EYTSRSCPPKTNST*SSITRKVLVMTVSSTVIA 607
+VTP P S G PP +T E T+ S PP +ST + +T S+T+++
Sbjct: 109 TVTPTPTPTTGSTG--PPTHTSTAPIAELTT-SNPPPESSTPQTSRSTSSPLTESTTLLS 165
Query: 608 PLTPSNTTGTLSPPCTKATSCSSS 679
L P+ + +PP T ++S
Sbjct: 166 TLPPAIEMTSTAPPSTPTAPTTTS 189
Score = 29.9 bits (64), Expect = 8.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +2
Query: 440 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTP 619
++TP P ++ P TT T+ P T + ++ +S+T TP
Sbjct: 63 TMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQTP--------TMIPISTTTTVTPTP 114
Query: 620 SNTTGTLSPPCTKATS 667
+ TTG+ PP +T+
Sbjct: 115 TPTTGSTGPPTHTSTA 130
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.9 bits (64), Expect = 8.7
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 443 VTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPS 622
+TP T P + P TT T PP T + + T +T ++T TPS
Sbjct: 1001 ITPPTSTTTLPPTTTPSPPPTTTTTP---PPTTTPSPPTTTTPSPPITTTTTPPPTTTPS 1057
Query: 623 N-TTGTLSPPCTKATSCS 673
+ T T SPP T T+ S
Sbjct: 1058 SPITTTPSPPTTTMTTPS 1075
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 29.9 bits (64), Expect = 8.7
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 443 VTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPS 622
+TP T P + P TT T PP T + + T +T ++T TPS
Sbjct: 284 ITPPTSTTTLPPTTTPSPPPTTTTTP---PPTTTPSPPTTTTPSPPITTTTTPPPTTTPS 340
Query: 623 N-TTGTLSPPCTKATSCS 673
+ T T SPP T T+ S
Sbjct: 341 SPITTTPSPPTTTMTTPS 358
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.9 bits (64), Expect = 8.7
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 443 VTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPS 622
+TP T P + P TT T PP T + + T +T ++T TPS
Sbjct: 1626 ITPPTSTTTLPPTTTPSPPPTTTTTP---PPTTTPSPPTTTTPSPPITTTTTPPPTTTPS 1682
Query: 623 N-TTGTLSPPCTKATSCS 673
+ T T SPP T T+ S
Sbjct: 1683 SPITTTPSPPTTTMTTPS 1700
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,100,650
Number of Sequences: 237096
Number of extensions: 2303729
Number of successful extensions: 6907
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6899
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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