Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k07
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842 160 5e-40
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 154 4e-38
03_05_0387 + 23708447-23708470,23708616-23708739,23709081-237092... 45 3e-05
01_06_0521 + 30001662-30001752,30001883-30001999,30002099-300022... 39 0.002
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 38 0.005
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 34 0.051
06_01_0042 + 410061-410544,411401-411837 33 0.089
07_01_1147 + 10771305-10771619,10771991-10772077 31 0.63
08_02_1615 + 28257275-28258428,28258523-28259144 30 1.1
03_02_0930 - 12480983-12481888 29 1.4
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 29 1.9
10_08_0965 + 21915842-21916906 29 1.9
10_08_0041 - 14374684-14377339,14377371-14378233 29 2.5
07_01_0939 + 7939716-7940220,7940675-7941564 29 2.5
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229 28 3.3
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 28 3.3
07_03_0028 + 12611734-12612522 28 3.3
03_06_0680 - 35497868-35497884,35498058-35501961 28 3.3
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 28 3.3
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 28 3.3
12_01_0646 + 5474234-5476189 28 4.4
09_04_0258 - 16175258-16176069,16176111-16176414 28 4.4
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 28 4.4
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 28 4.4
06_03_0179 - 17604561-17606435 28 4.4
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 28 4.4
11_01_0791 + 6627961-6630702 27 5.8
07_01_0730 + 5562805-5563254 27 5.8
03_06_0404 + 33692534-33693607 27 5.8
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 27 5.8
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 27 5.8
11_01_0692 - 5700394-5700474,5700546-5702675,5705033-5706169,570... 27 7.7
09_02_0115 + 4413714-4414475 27 7.7
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 27 7.7
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 27 7.7
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 27 7.7
>02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842
Length = 355
Score = 160 bits (389), Expect = 5e-40
Identities = 74/125 (59%), Positives = 92/125 (73%)
Frame = +1
Query: 100 SSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQRLSNVKHKI 279
S VP +A +HCPGTQSE+AGKA ACAGCPNQ ICA+ PDP + I +R++ VKHKI
Sbjct: 14 SDVPADANEHCPGTQSEEAGKADACAGCPNQQICATAPKG-PDPDLVGIVERMATVKHKI 72
Query: 280 LILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDADICGPSQPRVLGVRGEQVHNSGSG 459
L+LSGKGGVGKST ++ + LA M D V +LD DICGPS P++LG+ G+ +H S G
Sbjct: 73 LVLSGKGGVGKSTFSAQLSFALAEM--DCQVGLLDIDICGPSIPKMLGLEGQDIHQSNLG 130
Query: 460 WSPVY 474
WSPVY
Sbjct: 131 WSPVY 135
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 154 bits (373), Expect = 4e-38
Identities = 74/127 (58%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Frame = +1
Query: 106 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPA----VXLIKQRLSNVKH 273
VP+NA HCPGTQSE AGKA ACAGCPNQ ICA+ PDP + I +R++ VKH
Sbjct: 8 VPENANDHCPGTQSEAAGKADACAGCPNQQICATAPKG-PDPGAITHLLAIIERMNTVKH 66
Query: 274 KILILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDADICGPSQPRVLGVRGEQVHNSG 453
KIL+LSGKGGVGKST ++ + LA M D V +LD DICGPS P++LG+ G+ +H S
Sbjct: 67 KILVLSGKGGVGKSTFSAQLSFALAEM--DHQVGLLDIDICGPSIPKMLGLEGQDIHQSN 124
Query: 454 SGWSPVY 474
GWSPVY
Sbjct: 125 LGWSPVY 131
>03_05_0387 +
23708447-23708470,23708616-23708739,23709081-23709203,
23710723-23710820,23711778-23711918,23712236-23712361,
23713316-23713486
Length = 268
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 256 LSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDADICGPSQPRVLGVRGE 435
++ V I + SGKGGVGKST I LA + V +LDADI GPS P ++ + +
Sbjct: 27 IAGVSDIIAVASGKGGVGKSTTAVNIAVALAKKF-QLKVGLLDADIYGPSIPTMMNLHAK 85
>01_06_0521 +
30001662-30001752,30001883-30001999,30002099-30002229,
30002320-30002370,30002639-30002689,30002864-30003007,
30003082-30003224,30003376-30003448,30003540-30003635,
30003737-30003835,30003905-30003958,30004032-30004155,
30004420-30004544,30004720-30004842,30004948-30005028
Length = 500
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 295 KGGVGKSTVTSLIGHGLASMSPDIXVXILDADICGPSQPRVL 420
KGGVGKSTV + + LA M V I DAD+ GPS P ++
Sbjct: 147 KGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVFGPSLPTMV 186
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 208 GEASQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILD 384
G+ + PDP V + L K + + GKGGVGK+T +S++ LAS + V D
Sbjct: 6 GDGAMPDPTV---RNLLEQESLKWVFVGGKGGVGKTTCSSILSILLASARQSVLVISTD 61
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 34.3 bits (75), Expect = 0.051
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 KQRLSNVKHKILILSGKGGVGK-STVTSLIGHGLASMS 357
K + NV +++ GKGGVGK STV S++G +A++S
Sbjct: 63 KLKEENVSTLTILVMGKGGVGKSSTVNSIVGERVATVS 100
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 33.5 bits (73), Expect = 0.089
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 277 ILILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDAD 390
+++ SGKGGVGK+T T+ + LA +S + +DAD
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLARLS--LSAVAVDAD 74
>07_01_1147 + 10771305-10771619,10771991-10772077
Length = 133
Score = 30.7 bits (66), Expect = 0.63
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 374 VYSMPTSAARASRECWASAESRSTTPARGG 463
V + P +AA S E WA+A R+TTP+ G
Sbjct: 72 VAASPAAAAAGSGEQWATATGRATTPSNLG 101
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +1
Query: 124 QHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQRLSNVKHKILILSGKGG 303
+H P + E + A G S+PD + L LS K + L G G
Sbjct: 412 EHKPSMEREGGVELEAVTGRVELRDVEFSYPSRPDVGI-LRGLSLSVPAGKTIALVGSSG 470
Query: 304 VGKSTVTSLI 333
GKSTV SLI
Sbjct: 471 SGKSTVVSLI 480
>03_02_0930 - 12480983-12481888
Length = 301
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 91 SNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQ 192
S+ S+VP AP+ P + G + C CPN+
Sbjct: 38 SDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNR 71
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +1
Query: 241 LIKQRLSNVKHK-ILILSGKGGVGKSTVTSLI 333
++++ L +H+ ++++ G GG+GK+T+ SL+
Sbjct: 85 IMERLLQPTEHREVIVIVGMGGIGKTTLASLV 116
>10_08_0965 + 21915842-21916906
Length = 354
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 338 CPISDVTVLFPTPPLPDKIRI 276
CP+ ++ P PPLPD +R+
Sbjct: 167 CPLCRASIALPHPPLPDLLRV 187
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 268 KHKILILSGKGGVGKSTVTSLIGHGL--ASMSPDIXVXILDADICGPSQPRVLGVRGEQV 441
+H +++ +G G + V GL A + +LDA G Q VL + +
Sbjct: 416 QHNLVVDAGAGAKQQKLVLDAADDGLHLAGVGGKQHNLVLDAGAGGKQQKLVLDAADDGL 475
Query: 442 HNSGSGW 462
H +G GW
Sbjct: 476 HLAGVGW 482
>07_01_0939 + 7939716-7940220,7940675-7941564
Length = 464
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 244 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLA 348
+KQR +K KILI GG + + L+ H L+
Sbjct: 429 VKQRADELKKKILICLKNGGSTQQAIDKLVDHMLS 463
>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
Length = 632
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 241 LIKQRLSNVKHKILILSGKGGVGKSTVTSLI 333
LIK+ + +L + G+GG+GKST+ +
Sbjct: 197 LIKKSAFEASYMVLAIVGQGGMGKSTLAQYV 227
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +1
Query: 94 NMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEA--SQPDPAVXLIKQRLSNV 267
N + + H P Q+ D G S+ G PNQ + S +A P +QR N
Sbjct: 1806 NQPKIYGSQMPHSP-IQTSDVGSQSSMQGSPNQTMLTSQQAPLHSSSPLAQQQQQRYMNP 1864
Query: 268 KH 273
H
Sbjct: 1865 SH 1866
>07_03_0028 + 12611734-12612522
Length = 262
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +1
Query: 76 RQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXLIKQR 255
+Q ++ ++ + + PGT S G + P + + A +S P P + +
Sbjct: 19 QQATVAATATATSDGIRDSPGTSSPFRGGGGSTTPTPQRPVKAGSSSSPPPPPTTAMDKT 78
Query: 256 LSNVKHKILIL 288
LS+V + +L
Sbjct: 79 LSSVANLAKLL 89
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 67 INSRQIVISNMSSVP-DNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVXL 243
+N +++I+ M++ + P+ P S K + NI + +
Sbjct: 126 VNEMEVLIAEMNAFRFEFRPE--PPISSMKWRKTDCKISNLSMNIAIRSRSEDKQKIINT 183
Query: 244 IKQRLSNVKHKILILSGKGGVGKSTVTSLI 333
+ ++SN +L + G GG+GK+T+ LI
Sbjct: 184 LLAQVSNRDLTVLPIVGMGGMGKTTLVQLI 213
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 280 LILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDADICGPSQPRVLG 423
+++ G G GKST L + PDI V + D P P V+G
Sbjct: 106 VMIMGDRGTGKSTTV----RSLVDLLPDIRVVVGDPFNSDPDDPEVMG 149
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 217 SQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLI 333
S+PD V L + L KI+ L G G GKSTV SLI
Sbjct: 416 SRPD-VVILDRFSLDFPAGKIVALVGGSGSGKSTVVSLI 453
>12_01_0646 + 5474234-5476189
Length = 651
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 250 QRLSNVKH-KILILSGKGGVGKSTVTSLIGH 339
Q N H I+ + G GG+GK+T+ LI H
Sbjct: 214 QDAKNNNHVPIMSIVGHGGIGKTTLAQLISH 244
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 291 R*RGGRKKYCDITNWARSCINES*YXRXYTRCR--HLRPEPAASVGRPRRAG 440
R R GR+ D+ + A +C ++ R T R H +PE +S RP RAG
Sbjct: 167 RQRHGRRHDDDVDDAAAACAADAEGARRPTDQRRGHGQPEATSSSARPARAG 218
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 324 ITNWARSCINES*YXRXYTRCRHLRPEPAASVGRPRRA 437
I N R +N Y YT CR P P A G+PR++
Sbjct: 404 IVNAVRDGLNRIPYF--YTVCRQEGPVPTAPAGKPRQS 439
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 262 NVKHKILILSGKGGVGKSTVTSLI 333
+V +++ + G GG+GK+T+T LI
Sbjct: 243 SVSPEVITIVGTGGIGKTTLTQLI 266
>06_03_0179 - 17604561-17606435
Length = 624
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +1
Query: 208 GEASQPDPAVXLIKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGLASMSPDIXVXILDA 387
G A P P L L+ +IL + G G GKST+ ++ A +P +L+A
Sbjct: 68 GAAQPPSPEYILRDVSLTARPGEILAVVGPSGAGKSTLLDILA---ARTAPTHGRLLLNA 124
Query: 388 DICGPSQPRVLGVRGEQV 441
PS R L Q+
Sbjct: 125 APLRPSSFRRLSAHVPQM 142
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 259 SNVKHKILILSGKGGVGKSTVTSLI 333
++V IL + G GGVGK+T+T L+
Sbjct: 191 NHVNLSILPIVGMGGVGKTTLTQLV 215
>11_01_0791 + 6627961-6630702
Length = 913
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 271 HKILILSGKGGVGKSTV 321
HK++ +SG GG+GK+T+
Sbjct: 192 HKVITVSGMGGLGKTTL 208
>07_01_0730 + 5562805-5563254
Length = 149
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 461 HPEPELWTCSPRTPNTRGWLGPQMSASSIXTX--ISGLIDARPCPISDVTVLFPTPPLPD 288
HP+P SPR+ +GP S+I + GL+ R CP+ ++L +P D
Sbjct: 83 HPDP-----SPRSTAGSAPIGPVADGSAIDNSAVLLGLLRHRGCPLPRHSILLCSPVAAD 137
Query: 287 KIRIL 273
+ ++
Sbjct: 138 PMPVV 142
>03_06_0404 + 33692534-33693607
Length = 357
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 229 PAVXLIKQRLSNVKHKILILSGKGGVGKS 315
P L+ + + VKHK +++ G G GKS
Sbjct: 38 PVAPLVLRHGAGVKHKAVVVMGATGTGKS 66
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 244 IKQRLSNVKHKILILSGKGGVGKSTVTSLIGHGL 345
IK+R +V ++L G G GKST++SL+G L
Sbjct: 147 IKERKESVT---VLLCGTSGCGKSTLSSLLGSRL 177
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 316 TVTSLIGHGLASMSPDIXVXILDADICGPSQPRVLGVR 429
TVTS++ +S SP + V +LD++I ++ VL V+
Sbjct: 2683 TVTSVVPSSSSSSSPVLFVSLLDSNIVVMNEGLVLSVK 2720
>11_01_0692 -
5700394-5700474,5700546-5702675,5705033-5706169,
5709679-5709975
Length = 1214
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 262 NVKHKILILS--GKGGVGKSTVTSLI 333
N+K KI+IL G GG+GK+T ++
Sbjct: 181 NIKDKIIILPIYGIGGIGKTTFAKMV 206
>09_02_0115 + 4413714-4414475
Length = 253
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 474 VNRGPPRAGVVDLLSADAQHSRLARAADVGIEYTYVYIRTH 352
V+ PRA V D + L R+ DV IE+ ++ +H
Sbjct: 157 VDADAPRAWVATCRDGDCRWRALPRSRDVAIEFDPYWLESH 197
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 241 LIKQRLSNVKHKILILSGKGGVGKSTVTSLI 333
L + + K IL + G GG+GK+T+ L+
Sbjct: 272 LTSEECARKKLSILAIIGDGGIGKTTLAKLV 302
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 259 SNVKHKILILSGKGGVGKSTVTSLI 333
SN K KI+ + G GG+GK+T+ + +
Sbjct: 195 SNRKTKIVYVVGMGGLGKTTLATAV 219
>05_01_0471 -
3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 106 VPDNAPQHCPGTQSEDAGKASACAGCPNQNI 198
VPDNA CP + + +A CP+Q++
Sbjct: 569 VPDNASLPCPEQHVPEETQINAGLSCPDQHL 599
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,821,289
Number of Sequences: 37544
Number of extensions: 291639
Number of successful extensions: 1203
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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