Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k06
(671 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF427497-1|AAL25121.1| 939|Drosophila melanogaster coiled-coil ... 31 1.4
AE014296-2212|ABC66151.1| 235|Drosophila melanogaster CG34032-P... 31 1.4
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 30 2.5
BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p pro... 30 2.5
AY060925-1|AAL28473.1| 167|Drosophila melanogaster GM06601p pro... 30 2.5
AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein... 30 2.5
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 30 2.5
AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-P... 30 2.5
AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-P... 30 2.5
BT022855-1|AAY55271.1| 528|Drosophila melanogaster IP13087p pro... 30 3.3
BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p pro... 30 3.3
BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p pro... 30 3.3
AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-P... 30 3.3
AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-P... 30 3.3
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha... 29 4.4
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros... 29 4.4
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro... 29 4.4
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA... 29 4.4
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 29 5.8
BT003475-1|AAO39478.1| 131|Drosophila melanogaster RE63453p pro... 29 7.6
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ... 29 7.6
>AF427497-1|AAL25121.1| 939|Drosophila melanogaster coiled-coil Y
protein protein.
Length = 939
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = -2
Query: 664 ASSRYSTLCSKTDKLGFRVQSYGSKTRARCKKTSFLGTF-PHVIQGLTAGLNSVVDDCSE 488
+S S S K+G G + +RC+ F H +Q L+AG +D C+
Sbjct: 723 SSGHISHSSSVLIKIGIS-NKMGKRISSRCRDGGQFDDFVKHTVQSLSAG---DIDGCAL 778
Query: 487 SKDLVVCFFETIAHAARCFCYCLV 416
K+L I CFC C V
Sbjct: 779 EKELRKILDMFIDECGFCFCKCNV 802
>AE014296-2212|ABC66151.1| 235|Drosophila melanogaster CG34032-PA
protein.
Length = 235
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +1
Query: 457 SQRSKRPNPWIHCNRQQRCSIQQ*GLG*HEEMYPRRKFSYNGLVSWIRSSERGNQACQFY 636
SQ+ ++PNPW++ + C+I L + YPR S GL S+ +
Sbjct: 134 SQQPQQPNPWLNRGQSPPCTISP--LYPYSCTYPRYPNSGAGLPSYTQQRSANGPQLVPP 191
Query: 637 CTECYNDC 660
CY +C
Sbjct: 192 TPPCYYNC 199
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p
protein.
Length = 1288
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 419 EAITKATSCVSDRLKEANDQILGFTAIVNNAVQSSSKALDDMRKCTQEGSF-LTTGSCLG 595
EA +CV++RL+ ++ L + A++S+ + ++ + E +F +++GS LG
Sbjct: 419 EAYEANNTCVANRLRFHEEKQLLLDKL-QEALKSTKLLEERLKSFSSESTFSISSGSSLG 477
Query: 596 SVALNAETKLVSFT 637
S++ + +SFT
Sbjct: 478 SLSTASSKSALSFT 491
>BT009967-1|AAQ22436.1| 1034|Drosophila melanogaster RE65864p
protein.
Length = 1034
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 817 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 874
Query: 344 RF 349
++
Sbjct: 875 KW 876
>AY060925-1|AAL28473.1| 167|Drosophila melanogaster GM06601p
protein.
Length = 167
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 70 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 127
Query: 344 RF 349
++
Sbjct: 128 KW 129
>AJ441108-1|CAD29584.1| 1030|Drosophila melanogaster SMC5 protein
protein.
Length = 1030
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 814 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 871
Query: 344 RF 349
++
Sbjct: 872 KW 873
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 419 EAITKATSCVSDRLKEANDQILGFTAIVNNAVQSSSKALDDMRKCTQEGSF-LTTGSCLG 595
EA +CV++RL+ ++ L + A++S+ + ++ + E +F +++GS LG
Sbjct: 419 EAYEANNTCVANRLRFHEEKQLLLDKL-QEALKSTKLLEERLKSFSSESTFSISSGSSLG 477
Query: 596 SVALNAETKLVSFT 637
S++ + +SFT
Sbjct: 478 SLSTASSKSALSFT 491
>AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-PB,
isoform B protein.
Length = 992
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 784 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 841
Query: 344 RF 349
++
Sbjct: 842 KW 843
>AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-PD,
isoform D protein.
Length = 1025
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 164 RKLIEDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMSN 343
R+ I DF L+ +AI+ + GLQ+E KQ+ + I + + +S+ + + N+ +
Sbjct: 817 REAIHDFQARLECMKSVNSEAISSY-QGLQNEVKQLEEGIQESVNQ-AKSIESGMSNLYD 874
Query: 344 RF 349
++
Sbjct: 875 KW 876
>BT022855-1|AAY55271.1| 528|Drosophila melanogaster IP13087p
protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 374 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 426
>BT022843-1|AAY55259.1| 667|Drosophila melanogaster IP12987p
protein.
Length = 667
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>BT022818-1|AAY55234.1| 667|Drosophila melanogaster IP13187p
protein.
Length = 667
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>AE014297-2218|AAF55322.2| 667|Drosophila melanogaster CG14885-PC,
isoform C protein.
Length = 667
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>AE014297-2217|ABI31174.1| 667|Drosophila melanogaster CG14885-PB,
isoform B protein.
Length = 667
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 357 ESVNLLD-IFSTAFVTLSCIFCISFEILSLICFASSCSPDVNPLMASLASSVA 202
++VN L+ +FS + F E + ++ A S +PDVNPL A A +A
Sbjct: 513 QTVNTLNKVFSALDEEIISPFVYKVETVGMVYMAVSGAPDVNPLHAEHACDLA 565
>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
protein.
Length = 1639
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSSKALDDMRKCTQE 562
H+ TKA + LKEAN +++ GF + V + +S+ KAL + +E
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKE 1427
>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
Drosophila mRNA forlaminin B2 chain. ).
Length = 1639
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSSKALDDMRKCTQE 562
H+ TKA + LKEAN +++ GF + V + +S+ KAL + +E
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKE 1427
>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p protein.
Length = 1639
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSSKALDDMRKCTQE 562
H+ TKA + LKEAN +++ GF + V + +S+ KAL + +E
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKE 1427
>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
protein.
Length = 1639
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 416 HEAITKATSCVSDRLKEAN---DQILGFTAIVNNAVQSSSKALDDMRKCTQE 562
H+ TKA + LKEAN +++ GF + V + +S+ KAL + +E
Sbjct: 1376 HDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKE 1427
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTISR 356
C C CL++QG + T C T N+I +
Sbjct: 10306 CECTCLLEQGKDSCTCNCMTDTNSIDK 10332
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 436 CFCYCLVKQGTNVVTVRCYTIPNTI 362
C C CL++QG + T C T N+I
Sbjct: 969 CECTCLLEQGNDSCTCNCMTDTNSI 993
>BT003475-1|AAO39478.1| 131|Drosophila melanogaster RE63453p
protein.
Length = 131
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = -3
Query: 411 RALTSLLCDVTQSRTPYPESVNLLDIFSTAFVTLSCIFCISFEILSLICFASSCSPDVNP 232
R T++ + P+ +LL + SC FC + + S +CF C P
Sbjct: 13 RPKTTITATLAIEMPSQPKLASLLAVLVLLCYCDSCFFCYAGKFSSSLCFLFFCVP---- 68
Query: 231 LMASLASSVAFCRFSTKSS 175
S SS F + ST+ +
Sbjct: 69 --FSFGSSFFFTKTSTRQT 85
>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
protein.
Length = 1871
Score = 28.7 bits (61), Expect = 7.6
Identities = 27/127 (21%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +2
Query: 176 EDFVENLQKATDEARDAINGFTSGLQDEAKQIRDKISNDIQKMQESVTNAVENMS---NR 346
+ V+NL+ D+ R + S + + K +S+D+Q+ +ES V+N+ ++
Sbjct: 1390 QQLVDNLKVELDKERKELAQVNSAFEAQTK-----LSDDLQRQKESAQQLVDNLKVELDK 1444
Query: 347 FTDSGYGVRDCVTSHSNDVSALFHEAITKATSCVSDRLKEANDQILGFTAIVNNAVQSSS 526
V+ + + + L E ++ + D LK ++ A VN+A ++ +
Sbjct: 1445 ERKELAQVKSAIGAQTKLSDDL--ECQKESVQQLVDNLKVELEKERKELAKVNSAFEAQT 1502
Query: 527 KALDDMR 547
K DD++
Sbjct: 1503 KLSDDLK 1509
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,418,062
Number of Sequences: 53049
Number of extensions: 601756
Number of successful extensions: 2204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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