Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k04
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 25 0.64
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 1.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.6
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 23 3.4
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 4.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 6.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.9
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 361 TGNNPFYLRIPHENYYRGHHLK 426
TG PF H+ + R HHLK
Sbjct: 5 TGEKPFECPECHKRFTRDHHLK 26
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 578 VKLTPKCFW--SGFNVYNPDFIKLAISMGLDM 489
+K+ C++ SG + PD L + MGL M
Sbjct: 317 IKILGDCYYCISGAPIERPDHAVLCVYMGLSM 348
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NLFISTFILKFLSMGSRQITEKSLSMLRSL 213
N F+S + ++G + +TE++L LR L
Sbjct: 144 NEFLSILPIFLYALGEQPLTEQNLEELRDL 173
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NLFISTFILKFLSMGSRQITEKSLSMLRSL 213
N F+S + ++G + +TE++L LR L
Sbjct: 182 NEFLSILPIFLYALGEQPLTEQNLEELRDL 211
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 412 LYSNSHEEYEDKMGCFQ 362
+Y ++ EE K+GCF+
Sbjct: 40 MYESNSEEQMKKLGCFE 56
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 439 PMTLLELQKLIDRNRVDISKPIDIA 513
P T LE+QK I + + D+ + I A
Sbjct: 157 PQTYLEIQKXIKKAKEDVIEVIQKA 181
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 610 FLQQICQLHHQLN*HQNAFGQDSMCITQILSSWQYQW 500
+LQQ Q HHQ + ++A Q+ L Q+Q+
Sbjct: 98 YLQQQQQQHHQDSSSEHASNQERFGYFSSLKDHQHQF 134
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 638 SLAHCTSILIFAANMSAP 585
SL+H T L+F NM+ P
Sbjct: 152 SLSHTTQDLVFIWNMTDP 169
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 467 NFCNSKSVIGGYSLFK 420
++CNSK+ G YS K
Sbjct: 217 DYCNSKTNTGEYSCLK 232
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 467 NFCNSKSVIGGYSLFK 420
++CNSK+ G YS K
Sbjct: 217 DYCNSKTNTGEYSCLK 232
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 250 GSKITQKRGRGQHGGDKHGAGNKGSGQRQN 339
G++ + G D GN+ +G +QN
Sbjct: 472 GNRQNDNKQNGNRQNDNKQNGNRQNGNKQN 501
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,098
Number of Sequences: 438
Number of extensions: 3945
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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