Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27k01
(554 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 27 0.096
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 2.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 3.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.4
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 27.5 bits (58), Expect = 0.096
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 17 FERNLHFINKNGLESDYCFMHHASSSFGCPSTCHRWCRRLGRLEQ---WRSQPLDTSMDR 187
FE ++ +NK+ + +MH + C R C RLGR+++ W + +
Sbjct: 218 FEGDIRIVNKDRRGELFYYMHQQIMA---RYNCERLCNRLGRVKRFINWHEPIPEAYFPK 274
Query: 188 IRSLV 202
+ SLV
Sbjct: 275 LDSLV 279
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 176 RYPRVDCAIVPASPTAGTTGG 114
++P + CA P+S TT G
Sbjct: 345 KFPSLACAAEPSSDAVSTTSG 365
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 404 FDTQTYSKIYNRYEKKNFWKKLTKNV 481
++ Y YN Y KK ++K N+
Sbjct: 324 YNNNNYKYNYNNYNKKLYYKNYIINI 349
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY-NKLYYNI 346
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 380 ICSTDRLIFDTQTYSKIYNRYEKKNFWKKLTKNV 481
I S + + + Y+ YN Y K N+ KL N+
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNY-NKLYYNI 113
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 276 VGGIQRACLDPTLPYC 323
V G AC +P+L YC
Sbjct: 165 VTGKTTACFEPSLDYC 180
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 386 STDRLIFDTQTYSKIYNRYEKKNFWKKLTKNVI 484
S + I + + I+N KN+ KKL N+I
Sbjct: 309 SKESKIISSLSNKTIHNNNNYKNYNKKLYYNII 341
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 419 YSKIYNRYEKKNFWKKLTKNVI 484
Y+ N Y N+ KKL N+I
Sbjct: 96 YNYNNNNYNNNNYNKKLYYNII 117
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 419 YSKIYNRYEKKNFWKKLTKNVI 484
Y+ N Y N+ KKL N+I
Sbjct: 96 YNYNNNNYNNNNYNKKLYYNII 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,290
Number of Sequences: 438
Number of extensions: 3224
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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