Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27j06
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 2e-06
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 45 9e-06
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 44 2e-05
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 43 5e-05
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 43 5e-05
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 42 8e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 1e-04
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 6e-04
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 39 6e-04
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 38 0.001
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 36 0.004
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 36 0.007
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 35 0.012
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 34 0.021
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 30 0.35
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 29 0.46
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 1.4
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 1.8
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 27 3.2
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 26 4.3
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 26 5.6
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 26 5.6
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.6
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 26 5.6
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 5.6
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 26 5.6
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 5.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 7.5
SPAC17C9.13c |cut8||tethering factor for nuclear proteasome Cut8... 25 7.5
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 25 7.5
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 25 9.9
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 47.6 bits (108), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 304 QGLVALVTGGSSGLGKATAELLVKQGGRVVICDL-PSTKGQNTAKSLGENAVFAPVDVTS 480
+G V L+TG + G+GK ++ + G RV D+ +K Q+ A +L DV+
Sbjct: 4 EGRVVLITGAAGGIGKVLCKMFTELGDRVAGIDIVDPSKVQDAALAL-------QADVSK 56
Query: 481 EDDVKEALQITLDKFGRLDALINCAGVA 564
D ++ A++ + G +D LIN AG+A
Sbjct: 57 ADQIETAIEKVIQTLGPIDVLINNAGLA 84
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 45.2 bits (102), Expect = 9e-06
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Frame = +1
Query: 304 QGLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGE-NAV---FAPVD 471
+G A+V GG+ G+G A + + G I +T G+ AK + + N V D
Sbjct: 20 KGKNAVVFGGARGIGHAICSVFAEAGANAFIV-YNTTPGEKAAKEIAQANGVKTYTCKCD 78
Query: 472 VTSEDDVKEALQITLDKFGRLDALINCAGVASASRVYNFKKEQPFDLNIFQNTIQVNLIG 651
VT +V+ A F +D ++ G+ + + E+ F N I VNL+G
Sbjct: 79 VTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEE------FANEINVNLLG 132
Query: 652 TFNV 663
FNV
Sbjct: 133 VFNV 136
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICDLPSTKG-----QNTAKSLGENAVFAPVDVTSE 483
L+TGG SG+GKA A + ++G +VI LP + ++ + G N +
Sbjct: 46 LLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWEGKLDKS 105
Query: 484 DDVKEALQITLDKFGRLDALINCAGVASASRVYNFKKEQPFDLNIFQN 627
D+ ++ + L K G +D L+N ++ ++ +DL N
Sbjct: 106 DNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTN 153
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 42.7 bits (96), Expect = 5e-05
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGENAVFAPVDVTSEDDVKE 498
LVTGGS GLGKA A+ LV +G V I TK Q L ++ + V+ E
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDLT 85
Query: 499 ALQITLDKFGRL----DALINCAGVASASRVYNFKKEQPFDLNIFQNTIQVNLIGTFNV 663
+ + RL D +++CAG S + F E D ++F+ ++ N + + V
Sbjct: 86 SYESVHSMIERLPFCPDHVVHCAG----SCIPGFFTE--LDPSVFEKQMRQNYLASVYV 138
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 42.7 bits (96), Expect = 5e-05
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 307 GLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGENA-----VFAPVD 471
G VALVTG S G+G TA L ++G +V + K Q K + + F +D
Sbjct: 42 GKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 472 VTSEDDVKEALQITLDKFGRLDALINCAGV 561
+ + V +A + + K +L L+N AG+
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 41.9 bits (94), Expect = 8e-05
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +1
Query: 313 VALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGENAVFAPVDVTSEDDV 492
V L+TG S G+G ATAE L K+ + + + + + ++ V DVT
Sbjct: 8 VILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVG-- 65
Query: 493 KEALQITLDKFGRLDALINCAGVASASRVYNFKKEQPFDLNIFQNTIQVNLIGTFNVIR 669
K +++ + KFG+LD++I AGV K D+N ++ +N ++
Sbjct: 66 KASIETAIKKFGKLDSVILNAGVLEP-----IAKIADADINEWRKLFDINFFSVVETVK 119
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 41.1 bits (92), Expect = 1e-04
Identities = 26/94 (27%), Positives = 44/94 (46%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGENAVFAPVDVTSEDDVKE 498
L+TG S GLG A ++ + QG V+ C ++ +T + +DVT V+
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIAC----SRAPDTITIEHSKLLKLKLDVTDVKSVET 64
Query: 499 ALQITLDKFGRLDALINCAGVASASRVYNFKKEQ 600
A + +FG +D +IN AG ++ E+
Sbjct: 65 AFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEE 98
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 445 ENAVFAPVDVTSEDDVKEALQITLDKFGRLDALINCAGVASASRVYNFKKEQPFDLNIFQ 624
EN + +DV + +K++++ + FGR+D L+N AG + S + + +EQ
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQ------IH 67
Query: 625 NTIQVNLIGTFNVIR 669
N N+ G VI+
Sbjct: 68 NIFNTNVFGALEVIK 82
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 445 ENAVFAPVDVTSEDDVKEALQITLDKFGRLDALINCAGVASASRVYNFKKEQPFDLNIFQ 624
EN + +DV + +K++++ + FGR+D L+N AG + S + + +EQ
Sbjct: 14 ENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQ------IH 67
Query: 625 NTIQVNLIGTFNVIR 669
N N+ G VI+
Sbjct: 68 NIFNTNVFGALEVIK 82
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 37.9 bits (84), Expect = 0.001
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Frame = +1
Query: 307 GLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTA-------KSLGENAVFAP 465
G+V +VTGGSSG+G+ E L G +VVI L + Q T K ++
Sbjct: 75 GMVVMVTGGSSGIGQVVVEKLASLGAQVVIL-LRTEPDQFTVDYIMDLRKRTKNQLIYTE 133
Query: 466 V-DVTSEDDVKEALQITLD--KFGRLDALINCAGV 561
V D++S V++ +D RLD ++ C+GV
Sbjct: 134 VCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGV 168
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 292 IFMSQGLVALVTGGSSGLGKATAELLVKQGGRVVICDL---PSTKGQNTAKSLGENAVFA 462
+F +G +V G + G+G + A + GG V+I L P+ K + A+ G
Sbjct: 16 LFSLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTL 75
Query: 463 PVDVTSEDDVKEALQITLDKFGRLDALINCAGV 561
+D++ D V+ ++ F + ++ AG+
Sbjct: 76 KIDISRSDTVEAGVEEIQKIFKEIHVVVANAGM 108
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 35.5 bits (78), Expect = 0.007
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Frame = +1
Query: 292 IFMSQGLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSL----GENAVF 459
+F +G L+TGGS G+G + A+ G V + + K A L G A
Sbjct: 4 MFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKA 63
Query: 460 APVDVTSEDDVKEALQITLDKF-GRLDALINCAGVASASRVYNFKKEQPFDLNIFQNTIQ 636
+ + V E +++ GRLD +I AG+A K E +I+ +
Sbjct: 64 YSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNE-----DIWTKVVG 118
Query: 637 VNLIGTF 657
+NL G +
Sbjct: 119 INLNGAY 125
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 34.7 bits (76), Expect = 0.012
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +1
Query: 307 GLVALVTGGSSGLGKATAELLVKQGG-RVVICDLPSTKGQNTAKSLGE----NAVFAPVD 471
G L+TG SSG+GK+TA + K ++++ + + AK L + + +D
Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLD 65
Query: 472 VTSEDDVKEALQITLDKFGRLDALINCAGVA 564
V+ + ++ +F +D LIN AG+A
Sbjct: 66 VSDLKSIPGVIESLPKEFADIDVLINNAGLA 96
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 33.9 bits (74), Expect = 0.021
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSL----GENAVFAPVDVTSED 486
L+TGGSSGLGK A++ ++G + I + T +SL G+ DV S
Sbjct: 5 LITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQS-- 62
Query: 487 DVKEALQITLDKFGRLDALINCAGVASAS 573
D+K I + +D +++ AGV +S
Sbjct: 63 DMKNLKSIF--ESVEIDTVVHAAGVLQSS 89
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 29.9 bits (64), Expect = 0.35
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICD-LPSTKGQ---NTAKSLGENAVFAPVDVTSE 483
LVTGG+ +G T +L+++G VVI D L +++ + K G+ +F VD+ E
Sbjct: 10 LVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLDE 68
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 29.5 bits (63), Expect = 0.46
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 304 QGLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSL 441
+G A+VTG + G+GK A L G VV+ K AK L
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKEL 101
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 482 SEVTSTGANTAFSP-RLLAVFWPLVEGKSQITTLPPCFTNSSAVAF 348
S+V T A S R+L +F P++ ++ +TT P F + + F
Sbjct: 491 SKVRGTAVGLAASANRILGIFSPVIAMRANLTTSAPIFVSGALFIF 536
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 568 HSQRLHSL*EHPIDQTCLKLSVEPPSHHLPKLHQQVQTLH 449
++Q H EHP QT K + +PPS+HLP QQ+ +H
Sbjct: 107 NNQVTHIDQEHP-SQT--KSTSQPPSNHLPAF-QQIPPIH 142
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 319 LVTGGSSGLGKATAELLVKQGGRVVICD 402
LVTGG+ +G T L+ G +V+I D
Sbjct: 9 LVTGGAGYIGSHTVIELINHGYKVIIVD 36
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 26.2 bits (55), Expect = 4.3
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +1
Query: 307 GLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGE------NAVFAPV 468
G+V ++ GG+ G+G + + L + G V S +G +A L + N +
Sbjct: 6 GIVYVIVGGNRGIGLSLVKELSNKEGVTVFA---SARGPGSASELKDWSKTHSNVHIIKL 62
Query: 469 DVTSEDDVKEA 501
DVTS K+A
Sbjct: 63 DVTSLRSAKDA 73
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 154 HVVTYIGYTYLLTF*NIIKVFGVLYYGSKYFY 59
+++ IG Y L I +FG LY GS FY
Sbjct: 218 YLIIVIGILYTLEMLLKIYLFGFLYDGSSSFY 249
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 307 GLVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAKSLGENA 453
GL ++ GG G G + + + + R + +P+T G+ S N+
Sbjct: 353 GLTLVLIGGKQGKGASDSNVYMLDTSRFRLGSVPTTSGRQRNTSFFSNS 401
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 371 TNSSAVAFPNPDDPPVTKATRP 306
+NSS V+ P PPV + TRP
Sbjct: 239 SNSSGVSSPTSVPPPVQRNTRP 260
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 88 VLYYGSKYFYKN-IP-ITYKHKFNY 20
V+YYG KY KN P +TY HK ++
Sbjct: 177 VIYYGCKYRSKNRFPTLTYLHKNSF 201
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = -3
Query: 563 ATPAQFIRASNRPNLSKVICRASFTSSSEVTSTGANTAFSPRLLAVFWPLVEGKSQITTL 384
+ P Q I +S+ + + V +S TSSS + +P +A S ITT
Sbjct: 262 SVPTQTIDSSSFTSSTPVSLTSSSTSSSGSSQDSTTIDSTPSTIATSTLQPTTSSPITTS 321
Query: 383 PPCFTNSSAVAFPN 342
P +++ +P+
Sbjct: 322 APSLSSALPTTYPS 335
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 5.6
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -3
Query: 569 ALATPAQFIRASNRPNLSKVICRASFTSSSEVTSTGANTAFSPRLLAVFWPLVEGKSQIT 390
A A PA ASN+P+ S ++ S +VTS + T+F L + P S
Sbjct: 358 APAGPAMAPSASNKPSASSTTKSSNSKSKKKVTSI-SGTSFFKNLASSTKPTSASSSTKA 416
Query: 389 TLPPCFTNSS 360
L TN S
Sbjct: 417 PLTKQQTNPS 426
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 508 SVEPPSHHLPKLHQQVQTLHSRQGF*QYFGLWLRVSH 398
+VE ++ K + V +R GF QYF W H
Sbjct: 312 TVENEPENIEKQFESVSAPANRSGFIQYFRQWHHFKH 348
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 500 ASFTSSSEVTSTGANTAFSPRLLAVFWPLVEGKSQITTLPPCFTNSSAVAFPNP 339
+SFTSS+ +T T + F G + T+ PP ++NSS + P
Sbjct: 418 SSFTSSNSSYTT---TLTASNTTVTFTGTGTGSATFTSSPPFYSNSSVIPTSAP 468
>SPAC17C9.13c |cut8||tethering factor for nuclear proteasome
Cut8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 490 HHLPKLHQQVQTLHSRQGF*QYFGLWLRVSHR*QLCPLVLL 368
H LP+ H ++ Q + + G WL V + + P+V L
Sbjct: 148 HELPEFHNPNHNVYKSQAYYELTGAWLVVLRQLEDRPVVPL 188
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 503 RASFTSSSEVTSTGA--NTAFSPRLLAV 426
+ SF+SSS + A N AF PRLL V
Sbjct: 288 KKSFSSSSSIRKADASRNPAFPPRLLLV 315
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 55 FCKSIWSHSTVPQKLL*YFRKLANMYTQYR 144
FC++ W P KL +KL MY Y+
Sbjct: 296 FCQATWHGDLSPCKLEGDSKKLVEMYLNYQ 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,777,353
Number of Sequences: 5004
Number of extensions: 57163
Number of successful extensions: 195
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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