Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27i10
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.6  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   3.4  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   3.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   7.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 124 NLFISTFILKFLSMGSRXITEKSLSMLRSL 213
           N F+S   +   ++G + +TE++L  LR L
Sbjct: 144 NEFLSILPIFLYALGEQPLTEQNLEELRDL 173


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 124 NLFISTFILKFLSMGSRXITEKSLSMLRSL 213
           N F+S   +   ++G + +TE++L  LR L
Sbjct: 182 NEFLSILPIFLYALGEQPLTEQNLEELRDL 211


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 361 TGNNPFYLRIPHENYYXGHHLK 426
           TG  PF     H+ +   HHLK
Sbjct: 5   TGEKPFECPECHKRFTRDHHLK 26


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 412 LYSNSHEEYEDKMGCFQ 362
           +Y ++ EE   K+GCF+
Sbjct: 40  MYESNSEEQMKKLGCFE 56



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 648 ITCSLAHXTSILIFCSK 598
           I C+L H  ++ I CS+
Sbjct: 12  IYCALVHADTVAILCSQ 28


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 250 GSKITQKRGRGQHGGDKHGAGNKGSGQRQN 339
           G++    +  G    D    GN+ +G +QN
Sbjct: 472 GNRQNDNKQNGNRQNDNKQNGNRQNGNKQN 501


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 648 ITCSLAHXTSILIFCSK 598
           I C+L H  ++ I CS+
Sbjct: 12  IYCALVHADTVAILCSQ 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,286
Number of Sequences: 438
Number of extensions: 3321
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)