Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27h06
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070109-1|AAH70109.1| 239|Homo sapiens chromosome 22 open read... 44 4e-04
BC002924-1|AAH02924.2| 230|Homo sapiens C22orf13 protein protein. 44 4e-04
AK054681-1|BAB70791.1| 239|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AB049215-1|BAB68411.1| 200|Homo sapiens CG13760 gene product [D... 44 4e-04
AJ130711-1|CAB51127.1| 374|Homo sapiens QA79 membrane protein, ... 33 1.3
AF193441-1|AAF06790.1| 374|Homo sapiens Siglec-7 protein. 33 1.3
AF178981-1|AAF44346.1| 316|Homo sapiens D-siglec precursor prot... 33 1.3
BC007514-1|AAH07514.1| 609|Homo sapiens ARAF protein protein. 30 6.8
>BC070109-1|AAH70109.1| 239|Homo sapiens chromosome 22 open reading
frame 13 protein.
Length = 239
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -2
Query: 668 FRT*SSYLLSFVIQDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAG 489
++ S Y F ++T RV F A V + +VS+K++ +HL AIVLV++G
Sbjct: 95 YKNQSFYRKHFDTEET-RVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSG 153
Query: 488 LLSCDLCKHN-KLGSEQ*VGTHFLCKVNRYSG 396
+L CDLC K G H C+ Y G
Sbjct: 154 VLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQG 185
>BC002924-1|AAH02924.2| 230|Homo sapiens C22orf13 protein protein.
Length = 230
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -2
Query: 668 FRT*SSYLLSFVIQDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAG 489
++ S Y F ++T RV F A V + +VS+K++ +HL AIVLV++G
Sbjct: 85 YKNQSFYRKHFDTEET-RVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSG 143
Query: 488 LLSCDLCKHN-KLGSEQ*VGTHFLCKVNRYSG 396
+L CDLC K G H C+ Y G
Sbjct: 144 VLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQG 175
>AK054681-1|BAB70791.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ30119 fis, clone BRACE1000070. ).
Length = 239
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -2
Query: 668 FRT*SSYLLSFVIQDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAG 489
++ S Y F ++T RV F A V + +VS+K++ +HL AIVLV++G
Sbjct: 95 YKNQSFYRKHFDTEET-RVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSG 153
Query: 488 LLSCDLCKHN-KLGSEQ*VGTHFLCKVNRYSG 396
+L CDLC K G H C+ Y G
Sbjct: 154 VLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQG 185
>AB049215-1|BAB68411.1| 200|Homo sapiens CG13760 gene product
[Drosophila melanogaster] homolog protein.
Length = 200
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -2
Query: 668 FRT*SSYLLSFVIQDTQRVYSRFRDALDSGVQAVERSVSMKELVSHLTDRGPAIVLVDAG 489
++ S Y F ++T RV F A V + +VS+K++ +HL AIVLV++G
Sbjct: 56 YKNQSFYRKHFDTEET-RVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSG 114
Query: 488 LLSCDLCKHN-KLGSEQ*VGTHFLCKVNRYSG 396
+L CDLC K G H C+ Y G
Sbjct: 115 VLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQG 146
>AJ130711-1|CAB51127.1| 374|Homo sapiens QA79 membrane protein,
splice product airm-2 protein.
Length = 374
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -1
Query: 456 ARL*TIGRYTFLM*SKSIQRQYSYLSAPNVITDPPDPLTVLL----GTTST 316
AR+ GRY F M +I+ Y Y +TDPP LTV + GT ST
Sbjct: 113 ARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTDPPQNLTVTVFQGEGTAST 163
>AF193441-1|AAF06790.1| 374|Homo sapiens Siglec-7 protein.
Length = 374
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -1
Query: 456 ARL*TIGRYTFLM*SKSIQRQYSYLSAPNVITDPPDPLTVLL----GTTST 316
AR+ GRY F M +I+ Y Y +TDPP LTV + GT ST
Sbjct: 113 ARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTDPPQNLTVTVFQGEGTAST 163
>AF178981-1|AAF44346.1| 316|Homo sapiens D-siglec precursor
protein.
Length = 316
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -1
Query: 456 ARL*TIGRYTFLM*SKSIQRQYSYLSAPNVITDPPDPLTVLL----GTTST 316
AR+ GRY F M +I+ Y Y +TDPP LTV + GT ST
Sbjct: 113 ARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTDPPQNLTVTVFQGEGTAST 163
>BC007514-1|AAH07514.1| 609|Homo sapiens ARAF protein protein.
Length = 609
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -3
Query: 382 QRPKRHYGSSRSLNGAFRYHKHRSPPSANPSLATKGSTSKLTH---RHSPLSFSPDLSES 212
Q+P R Y S + L+G R H+ S N L +G + + H H P +
Sbjct: 152 QQPSRFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQ 211
Query: 211 RFRSS 197
R RS+
Sbjct: 212 RIRST 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,784,877
Number of Sequences: 237096
Number of extensions: 2293607
Number of successful extensions: 5977
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5977
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -