Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt27f21
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...   140   2e-33
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...   140   2e-33
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    29   6.9  

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score =  140 bits (338), Expect = 2e-33
 Identities = 68/106 (64%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
 Frame = +3

Query: 318 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 491
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 492 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPT 629
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPT
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPT 132


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score =  140 bits (338), Expect = 2e-33
 Identities = 68/106 (64%), Positives = 84/106 (79%), Gaps = 2/106 (1%)
 Frame = +3

Query: 318 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 491
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 492 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPT 629
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPT
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPT 132


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 442 SVGDGHSSVCLFRRA*VSTESSGAGLHLGKAG-SANKRSKGGRSIKTRGLL 293
           S+    SS   + R  +   SSG  +  G  G S+N  S GG S  T GLL
Sbjct: 629 SISSSASSASFYNRLLLLDNSSGDAVVGGNGGGSSNISSSGGASSGTNGLL 679


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,435,454
Number of Sequences: 53049
Number of extensions: 567231
Number of successful extensions: 1387
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)