Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27f19
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 2.2
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 2.2
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical ... 26 5.1
U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiestera... 25 8.9
U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiestera... 25 8.9
U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiestera... 25 8.9
U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiestera... 25 8.9
U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiestera... 25 8.9
U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiestera... 25 8.9
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 309 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 365
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 355 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 411
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 279 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 335
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 276 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 332
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 282 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 338
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 269 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 325
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +1
Query: 55 YEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTL----FL-LICYIR--HLNNHFS 204
++++ + TI D I FF + H I + G+L FL +IC +R L HFS
Sbjct: 259 HKFVRSPLTIIDVISTGAFFFESLLHAILIQTGSLVTLDFLSMICVLRLFKLTQHFS 315
>Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical
protein F55C5.2 protein.
Length = 296
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 116 MKKVDP*ILSAIVKEASIYSYA 51
+KK+DP I++ I + S YSY+
Sbjct: 173 LKKIDPKIITGITVDRSYYSYS 194
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 LFLTILLGFYFTILQAYEYIEASFTIADRIYGSTFFIAT-GFHGIHVIIGTLFLLICYI 180
L L LLG+ Y +E ++ D Y + T GF +H + GT+ ++C I
Sbjct: 295 LVLVFLLGYMTISACVYTILEPMWSFLDSFYFCLVSLLTVGFGDLHPV-GTVEYMLCSI 352
>AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical
protein K09C6.8 protein.
Length = 548
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 145 IIGTLFLLICYIRHLNNHFSKNHHFGFEAA 234
+IG + +++C LN + +HF F AA
Sbjct: 79 VIGNMGMVVCRYLALNQYHQTIYHFHFRAA 108
>U28729-6|AAA68292.1| 549|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforma protein.
Length = 549
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 265 LVTYLLNLEHHYRNNHYHNFIHAA 288
>U28729-5|AAO38607.1| 674|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformd protein.
Length = 674
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 390 LVTYLLNLEHHYRNNHYHNFIHAA 413
>U28729-4|AAN60496.1| 599|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformc protein.
Length = 599
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 315 LVTYLLNLEHHYRNNHYHNFIHAA 338
>U28729-3|AAO38608.1| 612|Caenorhabditis elegans Phosphodiesterase
protein 4, isoforme protein.
Length = 612
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 328 LVTYLLNLEHHYRNNHYHNFIHAA 351
>U28729-2|AAK77625.1| 626|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformb protein.
Length = 626
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 342 LVTYLLNLEHHYRNNHYHNFIHAA 365
>U28729-1|ABB88209.1| 673|Caenorhabditis elegans Phosphodiesterase
protein 4, isoformg protein.
Length = 673
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 166 LICYIRHLNNHFSKNHHFGFEAAA 237
L+ Y+ +L +H+ NH+ F AA
Sbjct: 389 LVTYLLNLEHHYRNNHYHNFIHAA 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,394,876
Number of Sequences: 27780
Number of extensions: 86703
Number of successful extensions: 355
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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