Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27f06
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 114 4e-26
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 113 9e-26
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 87 7e-18
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 75 4e-14
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 71 6e-13
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 71 6e-13
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 67 8e-12
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 35 0.029
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 33 0.12
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 30 1.1
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 1.9
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 1.9
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 2.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 3.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 3.3
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 3.3
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 27 5.8
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 27 5.8
Z81485-5|CAB03976.1| 151|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 114 bits (274), Expect = 4e-26
Identities = 54/129 (41%), Positives = 83/129 (64%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
RS A T+ +A+ P PL L+E+E ++ T+R+ A I PLV++M+D+ +
Sbjct: 12 RSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQ 71
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
+ + F+NGLMGIE P +Y G G +F +LV+EEL++VDP+V+ +VD+ NTLV
Sbjct: 72 MHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAP 131
Query: 477 LFMKLGTEE 503
L ++LGTEE
Sbjct: 132 LIIQLGTEE 140
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 113 bits (271), Expect = 9e-26
Identities = 53/134 (39%), Positives = 81/134 (60%)
Frame = +3
Query: 102 ILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKM 281
I+ RS + A TP P+ +LTE+EL +T+RK + + + PLV++M
Sbjct: 15 IISTIRSSYSTATAVSISRHCEDFTGTPPPVNLLTENELFFADTVRKFSKDVVKPLVREM 74
Query: 282 EDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHN 461
+ ++ + Q +F+NGLMG+ P EY GSG +F M+V+EEL++ DP+V+A V IHN
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHN 134
Query: 462 TLVNSLFMKLGTEE 503
TL S+ + GTEE
Sbjct: 135 TLPVSMIIDYGTEE 148
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 87.0 bits (206), Expect = 7e-18
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLV 470
RI+ + + FD LMG++ +Y GSG +F ++L VEELS++DPA+A + + N LV
Sbjct: 66 ARINKQLLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALV 125
Query: 471 NSLFMKLGTEE 503
L + G EE
Sbjct: 126 APLIEEFGNEE 136
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +3
Query: 324 FDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
F+NGLMGIE P +Y G G F LV+EE+S+VD +V A VD+HNTL L ++LGTE+
Sbjct: 16 FENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEK 75
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 70.5 bits (165), Expect = 6e-13
Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
G N+ + ++ +EELSR +A H+ L + ++ G+EE
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEE 141
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 70.5 bits (165), Expect = 6e-13
Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 374
L ++E+A+R++IR+ A ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 375 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
G N+ + ++ +EELSR +A H+ L + ++ G+EE
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEE 141
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 66.9 bits (156), Expect = 8e-12
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 339 MGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
MG+ P EY GSG +F M+V+EEL++ DP+V+A V IHNTL S+ + GTEE
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEE 55
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 44.0 bits (99), Expect = 6e-05
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 207 EDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQMLFDNGLMGIETPVEYSGSGCN 383
E AM+ ++ KL E+I+P V + E R + +ML G+ + PV+Y G+G +
Sbjct: 27 EPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRD 86
Query: 384 FLTMMLVVEELSRVD 428
F + + E++ VD
Sbjct: 87 FAMSIAIAEQIGAVD 101
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 144 AKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDG-IRQM 320
A T S + R + E M++++ KL E+I+P V K E + R + +M
Sbjct: 40 AVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKM 99
Query: 321 LFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVD 428
L D+G+ G+ P + G+G + + E++ ++
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAIN 135
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLATEQISPLVKKMEDE 290
R +A+ + + S + PR PL L E+E + E ++ A + PLV++M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 291 HRIDDGIRQMLFDNGLMGIE 350
RI+ + + FD LMG++
Sbjct: 66 ARINKQLLKKAFDLKLMGLK 85
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LTEDE ++ + R+ E++ P V + + D + + GL+G Y G GC
Sbjct: 32 LTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLG----APYQGYGC 87
Query: 381 NFLTMM---LVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEE 503
+ + L+ E+ RVD + + + +LV G+E+
Sbjct: 88 AGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSED 131
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = +3
Query: 186 RPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEY 365
RP L D + E + A +++ P + + + + + + + G I ++
Sbjct: 22 RPGVGLERDVEDVLEAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDH 81
Query: 366 SGSGCNFLTMMLVVEELSRVDPAVAAYVDIHN 461
GSG + L ++ E+LS + AAY+ IHN
Sbjct: 82 GGSGLSRLHASVIFEQLSMGCVSTAAYISIHN 113
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
L+E + +++ K + + + P K ++ I + GLM + P +Y G G
Sbjct: 31 LSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGM 90
Query: 381 NFLTMMLVVEELS 419
L L+VE LS
Sbjct: 91 TTLETALIVEALS 103
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/95 (17%), Positives = 41/95 (43%)
Frame = +3
Query: 201 LTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 380
LT D+ R +RK +++ P+ + + I + G + + P Y G G
Sbjct: 28 LTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGLGV 87
Query: 381 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFM 485
+ ++ ++ EE++ +A + ++ + L +
Sbjct: 88 DMVSNCIISEEMAYGCSGIATAIMANDLALTPLIL 122
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/125 (24%), Positives = 53/125 (42%)
Frame = +3
Query: 117 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHR 296
++QA +V + + + +P+ E A + RK AT S + E
Sbjct: 14 KAQAQTSVETVAKRRGRPAKEKKQPVPKKAEPAKASKPRARKSATGNKSEKPQASVAEQA 73
Query: 297 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 476
I Q+ +N ++GIE P + + + VVE + R VAAY ++ T +N
Sbjct: 74 GISQIPQLQHNNEVIGIEAPTTSAAPSRAQIPEVPVVEHIER--HKVAAY--LNRTYLNR 129
Query: 477 LFMKL 491
++L
Sbjct: 130 RRLRL 134
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 206 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 245
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 114 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 230
W + AT T + A T TP+P T L ED ++++E
Sbjct: 175 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 214
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 379 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 417
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 74 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 178
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 377 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 415
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 401 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 315
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 332 WVDGHRNSGRIQRFRLQFPDNDVGGGRTVSSGPSR 436
W DGH F PDND G GR GP R
Sbjct: 123 WTDGHTTGTEAMVFGPGQPDNDHGAGR----GPQR 153
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 360 LPEFRCPSTHYQTTSVGYHHRCGVHLPF 277
L + C T +T S+G H G HLP+
Sbjct: 532 LESYSCIVTRAETLSIGDHFLVGPHLPY 559
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 360 LPEFRCPSTHYQTTSVGYHHRCGVHLPF 277
L + C T +T S+G H G HLP+
Sbjct: 482 LESYSCIVTRAETLSIGDHFLVGPHLPY 509
>Z81485-5|CAB03976.1| 151|Caenorhabditis elegans Hypothetical
protein C49F5.5 protein.
Length = 151
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 188 SWGNFCAVCFHLSLCSNGSRCL 123
S G F HL++C+NGS CL
Sbjct: 93 SCGLFKYTLSHLNMCTNGSHCL 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,723,103
Number of Sequences: 27780
Number of extensions: 257238
Number of successful extensions: 852
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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