Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27f04
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79201-1|CAA55792.1| 391|Homo sapiens SYT protein. 107 4e-23
CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein. 107 4e-23
CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein. 107 4e-23
BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma transl... 107 4e-23
BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma transl... 107 4e-23
BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma transl... 107 4e-23
AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein. 107 4e-23
AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein. 107 4e-23
AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein. 107 4e-23
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 107 4e-23
AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2... 107 4e-23
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 107 4e-23
AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1... 107 4e-23
BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma transl... 107 5e-23
AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein... 105 1e-22
AB014593-1|BAA31668.1| 404|Homo sapiens KIAA0693 protein protein. 105 1e-22
BC034494-1|AAH34494.1| 396|Homo sapiens synovial sarcoma transl... 103 6e-22
AL078633-5|CAI18836.1| 396|Homo sapiens synovial sarcoma transl... 103 6e-22
AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protei... 86 1e-16
BC017804-1|AAH17804.1| 77|Homo sapiens synovial sarcoma transl... 69 2e-11
AF201950-1|AAF17242.1| 77|Homo sapiens kiaa-iso protein protein. 69 2e-11
BC068993-1|AAH68993.1| 399|Homo sapiens SS18L1 protein protein. 57 5e-08
AL078633-4|CAC29252.1| 128|Homo sapiens synovial sarcoma transl... 57 5e-08
AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens ... 32 1.7
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 2.2
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 32 2.2
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 2.2
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 2.2
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 32 2.2
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 32 2.2
AK098275-1|BAC05274.1| 141|Homo sapiens protein ( Homo sapiens ... 32 2.2
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 32 2.2
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 32 2.2
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 32 2.2
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 32 2.2
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 32 2.2
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 31 3.9
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 31 5.2
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 30 6.8
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein. 30 6.8
>X79201-1|CAA55792.1| 391|Homo sapiens SYT protein.
Length = 391
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein.
Length = 422
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein.
Length = 414
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 488
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 488
Score = 107 bits (257), Expect = 4e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 107 bits (256), Expect = 5e-23
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 1 MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 61 LATIADSNQNMQSLLPAPPIQNMPMGPGGMNQSGPPPPPRSHNMPSDG 108
>AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein
protein.
Length = 492
Score = 105 bits (253), Expect = 1e-22
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Frame = +1
Query: 145 MSVAFAARGNRPP--LSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
+SVAFAA R ++PA IQKMLD+N HLIQ I + Q KG+ EC QYQQ+LH NLVY
Sbjct: 5 ISVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY 64
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQSPPINPPTNATDASAG 450
LA++AD+NQN+QS+LP PP Q + G ++QS P PP + S G
Sbjct: 65 LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDG 112
>AB014593-1|BAA31668.1| 404|Homo sapiens KIAA0693 protein protein.
Length = 404
Score = 105 bits (252), Expect = 1e-22
Identities = 59/94 (62%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Frame = +1
Query: 142 TMSVAFAARGNRPPLSPAQ--IQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLV 315
TMSVAFA+ R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQILHRNLV
Sbjct: 8 TMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLV 67
Query: 316 YLASVADANQNIQSILP-PPHQ---LATGNVSQS 405
YLA++AD+NQN+QS+LP PP Q L G ++QS
Sbjct: 68 YLATIADSNQNMQSLLPAPPTQNMNLGPGALTQS 101
>BC034494-1|AAH34494.1| 396|Homo sapiens synovial sarcoma
translocation gene on chromosome 18-like 1 protein.
Length = 396
Score = 103 bits (247), Expect = 6e-22
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
Frame = +1
Query: 145 MSVAFAARGNRPPLSPAQ--IQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFA+ R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQILHRNLVY
Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQS 405
LA++AD+NQN+QS+LP PP Q L G ++QS
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQS 93
>AL078633-5|CAI18836.1| 396|Homo sapiens synovial sarcoma
translocation gene on chromosomeber 1 protein.
Length = 396
Score = 103 bits (247), Expect = 6e-22
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
Frame = +1
Query: 145 MSVAFAARGNRPPLSPAQ--IQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVY 318
MSVAFA+ R Q IQKMLDEN HLIQ I EYQ+KG+ EC QYQQILHRNLVY
Sbjct: 1 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY 60
Query: 319 LASVADANQNIQSILP-PPHQ---LATGNVSQS 405
LA++AD+NQN+QS+LP PP Q L G ++QS
Sbjct: 61 LATIADSNQNMQSLLPAPPTQNMNLGPGALTQS 93
>AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protein
protein.
Length = 369
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Frame = +1
Query: 211 LDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLVYLASVADANQNIQSILP-PPHQ--- 378
LD+N HLIQ I + Q KG+ EC QYQQ+LH NLVYLA++AD+NQN+Q +LP PP Q
Sbjct: 1 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQPLLPAPPTQDMP 60
Query: 379 LATGNVSQSPPINPPTNATDASAG 450
+ G ++QS P PP + S G
Sbjct: 61 MGPGGMNQSGPPPPPRSHNMPSDG 84
>BC017804-1|AAH17804.1| 77|Homo sapiens synovial sarcoma
translocation gene on chromosome 18-like 2 protein.
Length = 77
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +1
Query: 145 MSVAFAA---RGNRPPLSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLV 315
MSVAF RG + ++ IQ++L+EN LI+ I EYQ KG+ EC QYQ +LHRNL+
Sbjct: 1 MSVAFVPDWLRG-KAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLI 59
Query: 316 YLASVADAN 342
YLA++ADA+
Sbjct: 60 YLATIADAS 68
>AF201950-1|AAF17242.1| 77|Homo sapiens kiaa-iso protein protein.
Length = 77
Score = 68.5 bits (160), Expect = 2e-11
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +1
Query: 145 MSVAFAA---RGNRPPLSPAQIQKMLDENAHLIQTIQEYQAKGQIMECHQYQQILHRNLV 315
MSVAF RG + ++ IQ++L+EN LI+ I EYQ KG+ EC QYQ +LHRNL+
Sbjct: 1 MSVAFVPDWLRG-KAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLI 59
Query: 316 YLASVADAN 342
YLA++ADA+
Sbjct: 60 YLATIADAS 68
>BC068993-1|AAH68993.1| 399|Homo sapiens SS18L1 protein protein.
Length = 399
Score = 57.2 bits (132), Expect = 5e-08
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 4/45 (8%)
Frame = +1
Query: 283 QYQQILHRNLVYLASVADANQNIQSILP-PPHQ---LATGNVSQS 405
+YQQILHRNLVYLA++AD+NQN+QS+LP PP Q L G ++QS
Sbjct: 52 RYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQS 96
>AL078633-4|CAC29252.1| 128|Homo sapiens synovial sarcoma
translocation gene on chromosomeber 1 protein.
Length = 128
Score = 57.2 bits (132), Expect = 5e-08
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 4/45 (8%)
Frame = +1
Query: 283 QYQQILHRNLVYLASVADANQNIQSILP-PPHQ---LATGNVSQS 405
+YQQILHRNLVYLA++AD+NQN+QS+LP PP Q L G ++QS
Sbjct: 52 RYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQS 96
>AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ46148 fis, clone TESTI4000600. ).
Length = 167
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 372 SSISHRKCISISTYKSPNQCN*CICWWSTS 461
S ++HR+C+S + +S QC C+ W TS
Sbjct: 127 SQVAHRRCLSRAILQSGPQCQSCLSIWVTS 156
>AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ43926 fis, clone TESTI4012556. ).
Length = 167
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 372 SSISHRKCISISTYKSPNQCN*CICWWSTS 461
S ++HR+C+S + +S QC C+ W TS
Sbjct: 127 SQVAHRRCLSRAILQSGPQCQSCLSIWVTS 156
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 680
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 429
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 680
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 680
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 649 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 680
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 429
>AK098275-1|BAC05274.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ40956 fis, clone UTERU2011410. ).
Length = 141
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 372 SSISHRKCISISTYKSPNQCN*CICWWSTS 461
S ++HR+C+S + +S QC C+ W TS
Sbjct: 101 SQVAHRRCLSRAILQSGPQCQSCLSNWVTS 130
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 1078 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 1109
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 653 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 684
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 399 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 430
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 870 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 901
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 31.9 bits (69), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 364 PPPHQLATGNVSQSPPINPPTNATDASAGGQQ 459
PPP +TG+ + P + PP+ A S G Q
Sbjct: 398 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQ 429
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 31.1 bits (67), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 319 LASVADANQNIQSILPPPHQL-ATGNVSQSPPINPPTNAT 435
+AS A + +PPP L ATG+ +PPI P T+ T
Sbjct: 1469 MASSASNHSAPTGTIPPPTTLKATGSTHTAPPITPTTSGT 1508
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein ABP620
protein.
Length = 5430
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 169 GNRPPLSPAQIQKMLDENA-HLIQTIQEYQAKGQIMECHQYQQILHRNLVYLASVADANQ 345
G+ PP + K L++ HL + ++ +KG ++E Y+ NL+ + D+
Sbjct: 2281 GSIPPTETSMSAKELEKQIEHLKSLLDDWASKGTLVEEINYKGTSLENLIMEITAPDSQG 2340
Query: 346 NIQSILP 366
SILP
Sbjct: 2341 KTGSILP 2347
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 319 LASVADANQNIQSILPPPHQL-ATGNVSQSPPINPPTNAT 435
+A+ A + +PPP L ATG+ +PPI P T+ T
Sbjct: 20 MATSASIHSAPTGTIPPPTTLKATGSTHTAPPITPTTSGT 59
>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
Length = 1822
Score = 30.3 bits (65), Expect = 6.8
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 178 PPLSPAQIQKMLDENAHLIQTIQEYQAKGQIMECH----QYQQILHRNLVYLASVADANQ 345
PPL P + Q E ++ +Q A Q + H QYQ I+ ++ L + Q
Sbjct: 362 PPLPPEEPQSEDPEEDARLKQLQAAAAHWQQHQQHRVGFQYQGIMQKH-TQLQQILQQYQ 420
Query: 346 NIQSILPPPHQLATGNVSQSPPINPP 423
I I PPPH AT + P I PP
Sbjct: 421 QI--IQPPPHIQAT---TPPPGIPPP 441
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,416,562
Number of Sequences: 237096
Number of extensions: 1852674
Number of successful extensions: 8224
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 7913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8213
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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