Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27f01
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 228 3e-60
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 228 3e-60
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 182 2e-46
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 182 2e-46
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 182 2e-46
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.1
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.1
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.1
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.4
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 7.1
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 228 bits (557), Expect = 3e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = +1
Query: 190 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 369
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 370 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 549
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 550 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLXIGRNTPSYQAIQ 684
E TTQGLDDL RCAQYKKDG FAKWRCV I TPS A++
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALK 165
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 228 bits (557), Expect = 3e-60
Identities = 108/165 (65%), Positives = 130/165 (78%)
Frame = +1
Query: 190 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 369
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 370 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 549
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 550 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLXIGRNTPSYQAIQ 684
E TTQGLDDL RCAQYKKDG FAKWRCV I TPS A++
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALK 165
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 182 bits (444), Expect = 2e-46
Identities = 91/153 (59%), Positives = 113/153 (73%)
Frame = +1
Query: 214 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 393
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 394 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 573
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 574 DDLAQRCAQYKKDGCHFAKWRCVLXIGRNTPSY 672
D LA+R A +KK GC FAKWRCVL IG +TPS+
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSH 164
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 182 bits (444), Expect = 2e-46
Identities = 91/153 (59%), Positives = 113/153 (73%)
Frame = +1
Query: 214 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 393
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 394 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 573
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 574 DDLAQRCAQYKKDGCHFAKWRCVLXIGRNTPSY 672
D LA+R A +KK GC FAKWRCVL IG +TPS+
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSH 164
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 182 bits (444), Expect = 2e-46
Identities = 91/153 (59%), Positives = 113/153 (73%)
Frame = +1
Query: 214 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 393
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 394 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 573
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 574 DDLAQRCAQYKKDGCHFAKWRCVLXIGRNTPSY 672
D LA+R A +KK GC FAKWRCVL IG +TPS+
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSH 164
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 450 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 587
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 220 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 363
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 364 YRQLLFSSDA 393
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 220 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 363
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 364 YRQLLFSSDA 393
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 220 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 363
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 364 YRQLLFSSDA 393
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +3
Query: 426 VPRDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 599
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 600 -VQEGRLPLRQVALRAEXWPQHPLV 671
V R + A P HP++
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMM 669
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 457 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 561
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 637 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 548
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical
protein T21H8.1b protein.
Length = 962
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 184 PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 330
P+MST PELQ++L ++A A + + E G ++++D+
Sbjct: 162 PSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDL 210
>Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1a protein.
Length = 920
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 184 PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 330
P+MST PELQ++L ++A A + + E G ++++D+
Sbjct: 162 PSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDL 210
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 611 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 450
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 354 PSSLSPTAIQL*RCALREHLWCDPVPRDPLP 446
P +++ T + RC + WCD PR PLP
Sbjct: 344 PDTMNSTTTLIGRC---DFDWCDDTPRVPLP 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,442
Number of Sequences: 27780
Number of extensions: 371879
Number of successful extensions: 1142
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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