Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27e24
(611 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY047546-1|AAK77278.1| 150|Drosophila melanogaster GH05862p pro... 138 7e-33
AF170829-1|AAD49739.1| 150|Drosophila melanogaster putative pro... 138 7e-33
AE014297-2615|AAF55625.1| 150|Drosophila melanogaster CG6008-PA... 138 7e-33
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 31 0.93
BT023834-1|AAZ86755.1| 477|Drosophila melanogaster LD25916p pro... 30 2.8
AE014298-821|AAF46103.2| 477|Drosophila melanogaster CG12728-PA... 30 2.8
>AY047546-1|AAK77278.1| 150|Drosophila melanogaster GH05862p
protein.
Length = 150
Score = 138 bits (333), Expect = 7e-33
Identities = 71/147 (48%), Positives = 92/147 (62%), Gaps = 7/147 (4%)
Frame = +2
Query: 101 MAALIKLRHMPL-VQRSVWNHFNKVSRNISTSKKNSDTATTACETKTED------KNWVS 259
M+AL +L + + +QRS+ + V R I+TS K +T T TED KNW S
Sbjct: 1 MSALFRLTNRAVALQRSLVANQAAVVRAINTSPKKDETITAPTSLTTEDFANPSPKNWQS 60
Query: 260 YGFDYTSKEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLELRRREKA 439
YGFDY + ED A +TFF +VTLC+V+G WAY PD R+WAQRE FLELRRRE A
Sbjct: 61 YGFDYKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDTQFRNWAQREGFLELRRRELA 120
Query: 440 GLPPISPNFIDPKLIKLPDESELCDVE 520
G+ +SPN++DP I LP + +L D E
Sbjct: 121 GVDLVSPNYVDPASITLPSDEDLGDTE 147
>AF170829-1|AAD49739.1| 150|Drosophila melanogaster putative
protein NP15.6 protein.
Length = 150
Score = 138 bits (333), Expect = 7e-33
Identities = 71/147 (48%), Positives = 92/147 (62%), Gaps = 7/147 (4%)
Frame = +2
Query: 101 MAALIKLRHMPL-VQRSVWNHFNKVSRNISTSKKNSDTATTACETKTED------KNWVS 259
M+AL +L + + +QRS+ + V R I+TS K +T T TED KNW S
Sbjct: 1 MSALFRLTNRAVALQRSLVANQAAVVRAINTSPKKDETITAPTSLTTEDFANPSPKNWQS 60
Query: 260 YGFDYTSKEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLELRRREKA 439
YGFDY + ED A +TFF +VTLC+V+G WAY PD R+WAQRE FLELRRRE A
Sbjct: 61 YGFDYKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDTQFRNWAQREGFLELRRRELA 120
Query: 440 GLPPISPNFIDPKLIKLPDESELCDVE 520
G+ +SPN++DP I LP + +L D E
Sbjct: 121 GVDLVSPNYVDPASITLPSDEDLGDTE 147
>AE014297-2615|AAF55625.1| 150|Drosophila melanogaster CG6008-PA
protein.
Length = 150
Score = 138 bits (333), Expect = 7e-33
Identities = 71/147 (48%), Positives = 92/147 (62%), Gaps = 7/147 (4%)
Frame = +2
Query: 101 MAALIKLRHMPL-VQRSVWNHFNKVSRNISTSKKNSDTATTACETKTED------KNWVS 259
M+AL +L + + +QRS+ + V R I+TS K +T T TED KNW S
Sbjct: 1 MSALFRLTNRAVALQRSLVANQAAVVRAINTSPKKDETITAPTSLTTEDFANPSPKNWQS 60
Query: 260 YGFDYTSKEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLELRRREKA 439
YGFDY + ED A +TFF +VTLC+V+G WAY PD R+WAQRE FLELRRRE A
Sbjct: 61 YGFDYKDQVEDRKATKSTFFVTVTLCLVWGSFYWAYLPDTQFRNWAQREGFLELRRRELA 120
Query: 440 GLPPISPNFIDPKLIKLPDESELCDVE 520
G+ +SPN++DP I LP + +L D E
Sbjct: 121 GVDLVSPNYVDPASITLPSDEDLGDTE 147
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 186 PPLKRTATPPQLLVRPKQKIRTGLATVLTIRAKKKTLMPITPP 314
PP RT PP RP K T +T+R + T P PP
Sbjct: 419 PPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPP 461
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 186 PPLKRTATPPQLLVRPKQKIRTGLATVLTIRAKKKTLMPITPP 314
PP RT PP RP K T +T+R + T P PP
Sbjct: 522 PPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPP 564
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 186 PPLKRTATPPQLLVRPKQKIRTGLATVLTIRAKKKTLMPITPP 314
PP RT PP RP K T +T+R + T P PP
Sbjct: 733 PPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPP 775
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 186 PPLKRTATPPQLLVRPKQKIRTGLATVLTIRAKKKTLMPITPP 314
PP RT PP RP K T +T+R + T P PP
Sbjct: 630 PPSVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPP 672
>BT023834-1|AAZ86755.1| 477|Drosophila melanogaster LD25916p
protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 173 SRNISTSKKNSDTATTACETKTEDKNWVSYGFDYTSKEEDTNA 301
S+N TS K D ++ + ++D+N S D SK+EDT++
Sbjct: 346 SKNGDTSSKYEDASSKDEDASSKDENTSSKDEDAPSKDEDTSS 388
>AE014298-821|AAF46103.2| 477|Drosophila melanogaster CG12728-PA
protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 173 SRNISTSKKNSDTATTACETKTEDKNWVSYGFDYTSKEEDTNA 301
S+N TS K D ++ + ++D+N S D SK+EDT++
Sbjct: 346 SKNGDTSSKYEDASSKDEDASSKDENTSSKDEDAPSKDEDTSS 388
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,310,233
Number of Sequences: 53049
Number of extensions: 566170
Number of successful extensions: 1577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -