Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt27e21
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical... 137 6e-33
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 38 0.009
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 36 0.029
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 33 0.15
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.15
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.15
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 33 0.20
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.36
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.36
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.36
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 32 0.36
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 32 0.47
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 32 0.47
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 31 0.62
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.62
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 31 0.82
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.82
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.82
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 31 0.82
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 31 0.82
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 31 0.82
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.82
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.82
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 31 1.1
Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.4
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 30 1.9
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.3
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 3.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.3
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 4.4
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 5.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.8
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 28 5.8
U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 5.8
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 5.8
Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 28 7.7
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 7.7
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.7
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 7.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 7.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 7.7
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.7
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.7
>AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical
protein W02H5.8 protein.
Length = 578
Score = 137 bits (332), Expect = 6e-33
Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Frame = +3
Query: 132 ETCVDDNLRGVVAVYPQLQLHPK-HRVITIRRQDDSKRVAILGGGGSGHEPFASGFIGSG 308
E VDD L G+V+ ++ H RV+ I + S V+++ GGGSGHEP+A+G++G G
Sbjct: 10 EEAVDDALFGLVSSNSNVKFHKSCRRVVHITDLNPSHHVSLIAGGGSGHEPYAAGYVGKG 69
Query: 309 MLDGAVAGGVFASPPTGHVLYGIAQLHKYNSGGVLVIIGNYTGDRLNFXXXXXXXXXXXX 488
+L A+AG VFASPP+ +V + + + +G +L +I NYTGDRLNF
Sbjct: 70 LLTAAIAGNVFASPPSRNVQAAL-EATRGEAGAILFVI-NYTGDRLNFGLAAERFNASGG 127
Query: 489 XVEGLIVGEDVA--SSKNKTGGRSMVGEVLFYKLCGAMALKGYDLETIRKTAVEANKNMA 662
+ + +DVA S +K G R + G VL K+ GAMA +G L+ I +T+ + +M
Sbjct: 128 TARVVTIADDVAIDSPNSKVGRRGLAGAVLTIKIAGAMAWEGKSLDEIYETSQKVVSSMG 187
Query: 663 TLGVCLSACSLPGQ 704
TLGV L SLPG+
Sbjct: 188 TLGVSLYTGSLPGK 201
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 373 PYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P + CP G K P AP I +P NP +G +P PP
Sbjct: 135 PCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPP 174
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.029
Identities = 26/107 (24%), Positives = 46/107 (42%)
Frame = -2
Query: 547 PPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPY 368
P + + A +P I + PA + + ++ + + P ++RTPP +C+
Sbjct: 160 PQEMLMNSAVGAPQITSTFQQPASYMQNSSDAQYKMNKIEYPPVSRTPP----VACSSRT 215
Query: 367 NTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
T + P ++ P P+P D S P+PPP +A L S
Sbjct: 216 GTLQRTPNRRLPISSTPQ--PQPTYADQMQSLPEPPPYTIAMQRLRS 260
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = -2
Query: 424 PMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P + RTPP P T P + PP T PS PEP NP P PPPP
Sbjct: 144 PRVPRTPPPRSPPPRRPPM-TPP--SPQRRPPRTPPS--PEPRNPPRTPPSPIPPPP 195
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 331 PATAPSSIPEPMNPDAKGSCPDPPPPR 251
P +P P + D + S P PPPPR
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPR 129
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -2
Query: 463 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 284
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 87 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 146
Query: 283 KGSCPDPP 260
P PP
Sbjct: 147 APIVPPPP 154
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -2
Query: 463 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 284
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 110 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 169
Query: 283 KGSCPDPP 260
P PP
Sbjct: 170 APIVPPPP 177
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -2
Query: 463 MALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDA 284
M P F P+ +P P ++ A PY P PP + P S+P P + A
Sbjct: 360 MGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAA 419
Query: 283 KGSCPDPP 260
P PP
Sbjct: 420 APIVPPPP 427
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = -2
Query: 565 SPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLC 386
+P PV+ A + P P+ ++ A AF+ P ++ +PV PMI P L
Sbjct: 77 APAFAPAPVVAAAPALA-PAYAPAPVVAAAPAFA---PAYAPAPVASPMIAAAPA---LA 129
Query: 385 SCAIPYNTCPVGGEAKTPPATAPSSIP 305
+ +I N PV PA AP+++P
Sbjct: 130 AASI--NGLPVAAAPAFAPAFAPAAVP 154
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Frame = -2
Query: 388 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKG-SCPDPPP----PRMATLLLSSC 224
C C C +G PP +P +P P P CP PPP P T+
Sbjct: 226 CGCGSSCGGCNMGCSC-LPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPPVTMYQPCM 284
Query: 223 LLMVMTRCFGCSCNCG 176
+ + RC G CG
Sbjct: 285 VPQYVPRCSGGCGGCG 300
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 221 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 262
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 207 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
P+GG A AP P P+ P G+ P PPPP L++S
Sbjct: 207 PIGGIAPVNAHGAPP--PPPLPPVGAGAPPPPPPPPPPAQLMAS 248
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.3 bits (70), Expect = 0.36
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Frame = -2
Query: 514 SPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKT 335
S T P T P ++A + A PK S +P P T PP + AIP E+ T
Sbjct: 209 STTSEPLTSAPRMVATTDA-PK-STAPATDPPRTTIPPAIVTTE-AIPPEVTTTTSESST 265
Query: 334 PPA------TAPSSIPEPMNPDAKGSCPDPP----PPRMAT 242
P +APS + P+A DPP PP + T
Sbjct: 266 APVPPEPLTSAPSMVATTDPPEATAPATDPPTTMIPPAVVT 306
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 451 KFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPM 296
+ SRSPV P+++ PP IP T P E ++PP+ P+S+P P+
Sbjct: 249 RISRSPVPPPVLSIPPPP----PPNIPLPTIPQ--EVQSPPSPRPTSVPPPI 294
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 451 KFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPM 296
+ SRSPV P+++ PP IP T P E ++PP+ P+S+P P+
Sbjct: 249 RISRSPVPPPVLSIPPPP----PPNIPLPTIPQ--EVQSPPSPRPTSVPPPI 294
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +3
Query: 255 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTGHVLYGIAQLHKYNSGGVLVIIGNYT 434
GGGG G GF GSG+L G++ G S GH YG Y GG + G Y+
Sbjct: 237 GGGGGGFGSTGLGF-GSGILAGSLLGYGLGSMWGGHHSYG-GWGGGYGGGGYGMAGGYYS 294
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.62
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 TSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPM----ITRTPP 401
T+PT+ + AT PT P+T+ A S A P + SP P + +PP
Sbjct: 576 TTPTVPVTTTVVPSSATV-PTTPPTTVTVAATTTSKA-PVVTTSPTLAPTSPTKLPTSPP 633
Query: 400 ELYLCSCAIPYN-TCPVGGEAK-TPPATAPSSIPEPMNPDAKGSCPDPPPPRMAT 242
S P N T P T TAP++ P+NP + + P PP T
Sbjct: 634 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTA---PVNPTSPTTAPTVPPVTTTT 685
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/98 (24%), Positives = 35/98 (35%)
Frame = -2
Query: 520 TSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEA 341
T++P P+T P + P + V +P T +P P T P
Sbjct: 497 TNTPPANPTTATPTTVG--TMTPSTGTTTVPVPTTTGSPTTQTTAPVTKP--TVPSSTTQ 552
Query: 340 KTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
PP T P+S P + P P T++ SS
Sbjct: 553 TAPPVTTPTSQPPVTTTSLLTTLTTPTVPVTTTVVPSS 590
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.62
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 TSPTILRPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPM----ITRTPP 401
T+PT+ + AT PT P+T+ A S A P + SP P + +PP
Sbjct: 632 TTPTVPVTTTVVPSSATV-PTTPPTTVTVAATTTSKA-PVVTTSPTLAPTSPTKLPTSPP 689
Query: 400 ELYLCSCAIPYN-TCPVGGEAK-TPPATAPSSIPEPMNPDAKGSCPDPPPPRMAT 242
S P N T P T TAP++ P+NP + + P PP T
Sbjct: 690 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTA---PVNPTSPTTAPTVPPVTTTT 741
Score = 29.1 bits (62), Expect = 3.3
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 7/146 (4%)
Frame = -2
Query: 643 STAVFRIVSRS*PFKAIAPHSL*NSTSPTILRPPVLFLLEATSSPTIRPS-------TLI 485
+TA V S I+PH L T + P + + ++SPT P+ T
Sbjct: 505 TTATPTTVGTSKQTNTISPH-LSTITGSIVTSTPTM-APQTSASPTTTPTHTTASQPTTT 562
Query: 484 PAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIP 305
++ + P + V +P T +P P T P PP T P+S P
Sbjct: 563 KPVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKP--TVPSSTTQTAPPVTTPTSQP 620
Query: 304 EPMNPDAKGSCPDPPPPRMATLLLSS 227
+ P P T++ SS
Sbjct: 621 PVTTTSLLTTLTTPTVPVTTTVVPSS 646
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 248
PP T P +IP ++ P PPPPR+
Sbjct: 422 PPTTEPPNIPYCWQQQSRLFAPSPPPPRV 450
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = -2
Query: 337 TPPATAP-SSIPEPMNPDAKGSCPDPPPPRMATLL-LSSCLLMVMTRCFGCSCNC----G 176
TPP+T+ P P+ P + G+ P PPPP L+ +++ ++M+ G S +
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSVQ 845
Query: 175 YTATTPRKLSSTHVS 131
PR+ S+ VS
Sbjct: 846 LKKAEPRETSAASVS 860
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 427 LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
LP TP + +IP P PP P+ + P + S P PPPP
Sbjct: 747 LPRSASTPQPIQQQQSSIPPPPPP-----PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = -2
Query: 337 TPPATAP-SSIPEPMNPDAKGSCPDPPPPRMATLL-LSSCLLMVMTRCFGCSCNC----G 176
TPP+T+ P P+ P + G+ P PPPP L+ +++ ++M+ G S +
Sbjct: 786 TPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSVQ 845
Query: 175 YTATTPRKLSSTHVS 131
PR+ S+ VS
Sbjct: 846 LKKAEPRETSAASVS 860
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 427 LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
LP TP + +IP P PP P+ + P + S P PPPP
Sbjct: 747 LPRSASTPQPIQQQQSSIPPPPPP-----PPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 255 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASP 350
GGGG GH+PF+S F G G GG +P
Sbjct: 98 GGGGGGHDPFSS-FFGDFFGGGGGHGGEEGTP 128
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -2
Query: 466 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 305
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 304 EPMNPDAKGSCPDPPPP 254
P P G CP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 248
PP P P P KG P PPPP M
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 352 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
GG + PP T P P P G P PPPP
Sbjct: 701 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -2
Query: 466 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 305
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 757
Query: 304 EPMNPDAKGSCPDPPPP 254
P P G CP PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 248
PP P P P KG P PPPP M
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 352 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
GG + PP T P P P G P PPPP
Sbjct: 701 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 732
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
PV + PP P P+P P P PPP R T L S
Sbjct: 583 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 623
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
PV + PP P P+P P P PPP R T L S
Sbjct: 600 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 640
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
PV + PP P P+P P P PPP R T L S
Sbjct: 712 PVASVMRMPPPVTP---PKPCTPLTSKKAPPPPPKRSDTTKLQS 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = -2
Query: 466 SMALPKFSRSPV*---LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATA---PSSIP 305
S ALP + P LP IT PP P P+ G PP P S
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPP-----PPPGGLPPITGGPPPPPPPGGLPPISGG 340
Query: 304 EPMNPDAKGSCPDPPPP 254
P P G CP PPPP
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 248
PP P P P KG P PPPP M
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 352 GGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
GG + PP T P P P G P PPPP
Sbjct: 284 GGSSALPPITG-GPPPPPGLPPITGGPPPPPPP 315
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 373 PYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P ++CP +P AT P S P+P+ +C PPPP
Sbjct: 1431 PVSSCP-SSRFSSPSATRPQS-PDPVPAAPAENCDLPPPP 1468
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGS-CPDPPPP 254
PV EAKTPP P P A + P PPPP
Sbjct: 147 PVEDEAKTPPEKPKVEEPAPAPAPAPAAVAPAPPPP 182
>Z46241-2|CAA86315.1| 144|Caenorhabditis elegans Hypothetical
protein C38D4.1b protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -2
Query: 415 TRTPPELYLCSCAIPYN-TCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATL 239
T T P + + + N T P G AK+P ATAP+ NP + P
Sbjct: 22 TTTTPNVPVSAATNTSNVTAPAGNSAKSPNATAPAG-----NPTKNVNVTAPAANTTQLA 76
Query: 238 LLSSCLLMVMTRCFGCSC-NCGYT 170
L+SS G C +C YT
Sbjct: 77 LVSSASPQTCKNGNGTHCPSCAYT 100
>Z46241-1|CAA86323.1| 462|Caenorhabditis elegans Hypothetical
protein C38D4.1a protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -2
Query: 415 TRTPPELYLCSCAIPYN-TCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPPRMATL 239
T T P + + + N T P G AK+P ATAP+ NP + P
Sbjct: 22 TTTTPNVPVSAATNTSNVTAPAGNSAKSPNATAPAG-----NPTKNVNVTAPAANTTQLA 76
Query: 238 LLSSCLLMVMTRCFGCSC-NCGYT 170
L+SS G C +C YT
Sbjct: 77 LVSSASPQTCKNGNGTHCPSCAYT 100
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 382 CAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
CA P CP P P P P CP PPPP
Sbjct: 38 CAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 349 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 254
G+ + PPA +P P P +P GS PPPP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 259
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 251
P G PP +P P +P GS P PPPPR
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 349 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 254
G+ + PPA +P P P +P GS PPPP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 280
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 251
P G PP +P P +P GS P PPPPR
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 349 GEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPP 254
G+ + PPA +P P P +P GS PPPP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 265
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAK--GSCPDPPPPR 251
P G PP +P P +P GS P PPPPR
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Frame = -2
Query: 529 LEATSSPTIRPSTLI-PAILAFSMALPKF---SRSPV*LPMITRTPPELYLCSCAIPYNT 362
+ +T S T S I PA + M P + + +P P +R PP Y S P NT
Sbjct: 172 ISSTPSTTTEESIRIHPAGYRYDMPTPAYHMNNNAPQYSPGYSRPPPPAYDSS---PVNT 228
Query: 361 --CPVGGEA-KT-------PPATAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSS 227
PV + +T P AP P +N + K P PPPP +T+ + +
Sbjct: 229 RMTPVATDNYRTHLHMKVHPVVKAPPPNPTMLNHN-KNMAPPPPPPAKSTISIET 282
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Frame = -2
Query: 550 RPPVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIP 371
+P V+ T PT P T + + + + +PV P T TPP +
Sbjct: 454 KPTVVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPV--PTTTNTPPANPTTATPTT 511
Query: 370 YNTC---PVGGEAKTPPATAP------SSIPE-PMNPDAKGSCPDPPPPRMAT 242
T P T P TAP ++ P P+NP + + P PP T
Sbjct: 512 VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTT 564
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 343 AKTPPATAPSSIPEPMNPDAKGSCPDPPP-PRMAT 242
A PP+ P+ P P + S P PPP P +AT
Sbjct: 466 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIAT 500
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 343 AKTPPATAPSSIPEPMNPDAKGSCPDPPP-PRMAT 242
A PP+ P+ P P + S P PPP P +AT
Sbjct: 473 APPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIAT 507
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPPRM 248
PP PSS+P P P P PPPP +
Sbjct: 503 PPIATPSSVPPPPPP------PPPPPPAL 525
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = -2
Query: 331 PATAPSSIPEPMNPD----AKGSCPDPPPPRMATLL 236
P PS +P P P A CP PPPP + L+
Sbjct: 98 PCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLV 133
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P G + P ++ P P P G P+PPPP
Sbjct: 472 PPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPP 506
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPP 254
P P P P P + G P PPPP
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPP 254
PP + + +P PM P G P PPPP
Sbjct: 265 PPPPSVTPMPPPM-PPTPGMTPRPPPP 290
Score = 28.3 bits (60), Expect = 5.8
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -2
Query: 523 ATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVG-G 347
AT P +P L+ +A S ++ P P +T PP + P P G
Sbjct: 237 ATGRPGYQPPPLMG--MAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 294
Query: 346 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPPR 251
PP P P P P G P PPP R
Sbjct: 295 MWPPPPPPPPGRTPGP--PGMPGMPPPPPPSR 324
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 331 PATAPSSIPEPMNPDAKGSCPDPPPPRM 248
P P P P G P PPPP M
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGM 341
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P G PP PS P P P G P PPPP
Sbjct: 356 PSAGPGMYPPPP-PSRPPAP--PSGHGMIPPPPPP 387
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 346 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
+AK P ATAP I ++ ++K + P PPPP
Sbjct: 27 KAKKPKATAPKPI-SSISSNSKVAPPAPPPP 56
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 255 GGGGSGHEPFASGFIGSG--MLDGAVAGGVFASPPTG 359
GGGG G GF G G G+ GG SPP+G
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSG 519
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPP 254
P P P P P + G P PPPP
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 334 PPATAPSSIPEPMNPDAKGSCPDPPPP 254
PP + + +P PM P G P PPPP
Sbjct: 275 PPPPSVTPMPPPM-PPTPGMTPRPPPP 300
Score = 28.3 bits (60), Expect = 5.8
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = -2
Query: 523 ATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCSCAIPYNTCPVG-G 347
AT P +P L+ +A S ++ P P +T PP + P P G
Sbjct: 247 ATGRPGYQPPPLMG--MAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 304
Query: 346 EAKTPPATAPSSIPEPMNPDAKGSCPDPPPPR 251
PP P P P P G P PPP R
Sbjct: 305 MWPPPPPPPPGRTPGP--PGMPGMPPPPPPSR 334
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 331 PATAPSSIPEPMNPDAKGSCPDPPPPRM 248
P P P P G P PPPP M
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGM 351
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 358 PVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
P G PP PS P P P G P PPPP
Sbjct: 366 PSAGPGMYPPPP-PSRPPAP--PSGHGMIPPPPPP 397
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Frame = -2
Query: 544 PVLFLLEATSSPTIRPSTLIPAILAFSMALPKFSRSPV*LPMITRTPPELYLCS-CAIPY 368
PV + P P P I + +P P+ +P+ P +Y + CA+P
Sbjct: 131 PVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVPP 190
Query: 367 NTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCP 269
P PA P + P A+ CP
Sbjct: 191 CPAPAATPVYAQPAPRPMPVYAPAPACAQPPCP 223
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Frame = -2
Query: 439 SPV*LPMITRTPPELYLCSCAIPYNTCPVGGEAKTPPATAPSS-IPEPMNPDAKGSCPDP 263
+P P + + PP+ PV + + P T+PS+ + P P K S DP
Sbjct: 403 APQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQDP 462
Query: 262 -----PPPR 251
PPP+
Sbjct: 463 IVQQDPPPK 471
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 255 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTG 359
GGGG P G G G G+ GG +AS P+G
Sbjct: 198 GGGGYAVAPSGGGGCGGG---GSSGGGGYASAPSG 229
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 255 GGGGSGHEPFASGFIGSGMLDGAVAGGVFASPPTG 359
GGGG P G G G G+ GG +AS P+G
Sbjct: 198 GGGGYAVAPSGGGGCGGG---GSSGGGGYASAPSG 229
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 370 YNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
Y+T P+ + K P PS P NP+ P+ P
Sbjct: 490 YDTAPLNEDRKDVPTAEPSHNVAPSNPEPVAVIPEETAP 528
>U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical
protein F26A10.2 protein.
Length = 620
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 325 TAPSSIPEPMNPDAKGSCPDPPPPRMATLLLSSCLLMVMTRCFGCSC-NCG 176
T P I +PM K + P PPPP + + + + + C C +CG
Sbjct: 4 TPPIGIEDPMGIQQKANEPPPPPPIVICPTEVDHINVTLEKNQQCECKDCG 54
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 343 AKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
A P A APS+ P P G P PPPP
Sbjct: 992 ASAPSAAAPSA---PKAPAGPGGPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 343 AKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
A P A APS+ P P G P PPPP
Sbjct: 231 ASAPSAAAPSA---PKAPAGPGGPPPPPPP 257
>Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical
protein K07A12.1 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 235 VREWPSLVVEDRDTNPLHQDS*VRECSM 318
+R +PS+VV+ D +H DS V C M
Sbjct: 332 IRHFPSVVVQLMDILQIHPDSAVMNCKM 359
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 352 GGEAKTPPATAPSSIPEPMNP-DAKGSCPDPPP 257
GG+ K PP + S + P P A + PD PP
Sbjct: 24 GGKKKAPPPKSASKMTAPTAPAPAPPAAPDAPP 56
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 388 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 388 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 388 CSCAIPYNTCPVGGEAKTPPATAPSSIPEPMNPDAKGSCPDPPPP 254
C + P P GG + A + P P P G+ P PPPP
Sbjct: 29 CQPSQPACANPCGGASAAAYAAPAAGYPRP--PIGYGAPPPPPPP 71
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 267 SGHEPFASGFIGSGMLDGAVAGGVFASP 350
SG E F S +G G VAGGV A+P
Sbjct: 5923 SGGEGFGSKVLGFAKKAGMVAGGVVAAP 5950
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 267 SGHEPFASGFIGSGMLDGAVAGGVFASP 350
SG E F S +G G VAGGV A+P
Sbjct: 5923 SGGEGFGSKVLGFAKKAGMVAGGVVAAP 5950
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 355 VGGEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPPR 251
VG ++PP P P P+ NP AK + P PPPP+
Sbjct: 66 VGRPTESPPLPPP---PLPLSNPPAKPT-PPPPPPK 97
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 355 VGGEAKTPPATAPSSIPEPM-NPDAKGSCPDPPPPR 251
VG ++PP P P P+ NP AK + P PPPP+
Sbjct: 288 VGRPTESPPLPPP---PLPLSNPPAKPT-PPPPPPK 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,816,442
Number of Sequences: 27780
Number of extensions: 422347
Number of successful extensions: 2216
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2105
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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